Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4254 ATGGACAAACGGTGGCCGTGGAAGAAAAAATCTTCCGACAAGGTTGTGATTGAGAAAACAGCTGCTTTGTTAGACTCATCAGATGCTTCTTCCAATCAGGACAACAACAAGAAACCAAATTATGTCAAAATCTCTGTTGAATCCTATTCACATCTGTCTGGTTTGGAGGATCAAGTGAAGACGTATGAGGAAAAAGTGAAGTCATATGACGAAAAAGTTAAGACATATGAGGAAAAAGTCCAGACATATGAGGAAAAAGTTCAGACACTTGAAGATGACATCAAGGAAATGAATGAAAAGCTTTCAGCTGCAAACTCTGAGATTAATACCAAGGAAAGCATGGTAAAACAACATGCTAAAGTAGCTGAAGAAGCTGTCTCAGGATGGGAAAAGGCTGAAGCCGAGGCTTTGGCATTGAAGGACCATCTGGAATCTGTCACTCTTTCAAAACTCACTGCCGAGGACCGCGCATCACATTTAGATGGTGCTCTTAAAGAATGTATGCGACAGATACGGAACCTTAAGGAAGAACATGAACAGAAAATACAGGAAGTTGCTCTGTCGAAAACCAAGCAATTAGACAAGATCAAGGGGGAGCTTGAGGCTAAGATAACTAGCTTTGAACAGGATCTCCGGAGGTCTGCTGCTGAAAACGGGGCACTGTCAAGGTCCTTGCAAGAGCGCTCTAACATGCTAATCAAATTAAGCAAAGAAAAAGCTTGTGCCGAGGCTGAAGTTGAGCATCTCAAGAGCACCATAGAATCATGTGAAAGAGAAATTAATTCGCTTAAATATGAACTCCATGTTGCTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGTGTAAAAAAGATTGCTAAATTAGAAGCTGAGTGCCAAAGACTACGGGGACTAGTTCGGAAAAAGTTACCTGGTCCAGCTGCACTTGCACAAATGAAACTAGAAGTTGAAAATCTTGGCCGAGATTATGGAGAAAGTCGATTAAGGAAATCACCTGTGAAGCCTGCTACCCCTAATTCGTCTCCACTACCTGAGTTCTCCCTGGAGAACGTACAGAATTTCCAGAAGGAGAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAACGTAACAGTGAATTGCAGGCCTCAAGGAGTACATGTGCTAAAACACTGAGCAAACTTCAAAGTTTAGAAGCACAACTTCAGACAAGTAACCAGCAGAACGGAACTCCAAGATCCAACATGCATGTAACCCATGAAAGTATTTATAGTCAAAATGCAAGCATTGCACCAAGCTTGGTTTCCATGTCCGAAGACGGAAATGATGATGCAGCAAGTTGTGCAGAGTCTTGGTCCACAACAATGGCCTCTGGGCTATCCCAAGTTTCTAAAAGGTGTACTGAGGAATCAAACAAATCCGAAGCCATTCAAAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAGTTAGCTCGTTTATCAATTGATTCCAACACAGTTTCATTGTCTTCGAACAACAAGGCAACTGATGTAGTGACCAATGATGTATCACAAGTTGGTACTGGCACAGTTGGCCTGTCTGAAACAAATGGTGATTCCAATCCATTGCCGAATCAAGTGTCTTCCAGTGCTTTGATTAATGCACCTGATCCCCAATCTGATGTTGGTGGCTTATTAGCAAAGCTTAGATCTAGAATATTACTGGTTTTTGAGTCCATTGCTAAGGATGCTGATATAGGGAAGATCATTGAAGATATTAAACATGTGCTAGAAGATTCATGTGATTCACGTGACATTGCTGTTCACAATTCTGTAGGTTTCATTTCCCAGGATGTACAACCATCTGATGCCACGTGTGATAGGCAGAATAATCCTGAAGATGCTGGCTTAAACCTTGAAAAGGAAACCATTTCATCCCTGCAGCCCAAAGAATATGTGCAGATAACTTCAGATTTAGATGCTGCAATTTCTCATATTCATGACTTTGTATTGTTACTAGGCAAAGAAGCAAATTCATTTCATGACATATCTTCGGATGGAAATGAAATGAGTCAAAAAATTGAGGAGTTTTCTGTCACCTTCAGTAAAGTTTTATGCAGCAATGCTAGTCTGCTACAGTTCGTTCTTGACCTTTCTTATGTTTTGGCTAAGGCAAGTGAACTCAGATTTAACGTCCTTGGATACAAGGGTACAGAAACCGAAACTAACAGTCTCGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGTTCAAGACAATTCATCTGGAGAAAGATATCAAAATGGTTGTTCCCGCGTTCTTAATCCCTGTTCTGATCCCGAGGTTCCTGATGATGGAAATTTAGTTCTGGGCTATGGAGCGAATGCGGCATCACAAAAAATGTCATCAGAGGAATTTGAAGAATTGAAACTAGAGAAAGAGAAAGTAACAACAGATCTGTCAATATGTACCGAGAATCTTGAAGTGGCCAAGTCTCAATTGCTAGAAACCGAGCAACTTCTAGCAGAAGTTAAATCACAGTTGGCTTCTTCTGAAAGATCAAATAGCTTGGCTGAGACACAGCTAAAATGTATGGCAGAGTCATATAAGTCACTTGAAACACGTGCCCAGGAGTTTGAAACTGAGCTGAACCATTTGCAAAGTAAGATAGAAACTCTGGAAAATGAGCTTCAAGATGAAAAGAGAGCTCATGAAGCTGCTTTGGTGAAGAGCAAGGAGCTAGAAGAGCAGTTACTAAGGATTGAGAGCTCAACTGCCGAAAATGACGCCAAGTATACACAGGAGAGAGATTTGGCAGCAGCCGCCGATAAGCTAGCCGAGTGTCAAGAAACTATATTCCTTCTGGGAAAGCAGTTAAATGCTCTACATCCTCAAAGTCAACCAATTGAGTCTCCTTACAACAACACAAGTCCAAATACTACTAGTAGCCCAAATCTTCAAGAAGTAGGTCAGTTGGAGATGGACAGTGCCACTTCTTCTTTTGTGCAAAGACTGAGTTCGGATTCCCCCTTGCATTTTTCCAATGGTTTATTTGTCCCATCAGATAACGATACAAATGTTCCGGCCAGATCTCCGGCACCGCTTCCAAAATCAAAACCAAAACACAGACCTACCAAGTCAGCCTCTTCTTCAACTTCTTCTGCCACTACGCCAGAGAAGCATGGACGGGGATTTAGTAGATTCTTTTCATCAAAAGGGAAACCTGCTTATTGA 3291 0.4129 MDKRWPWKKKSSDKVVIEKTAALLDSSDASSNQDNNKKPNYVKISVESYSHLSGLEDQVKTYEEKVKSYDEKVKTYEEKVQTYEEKVQTLEDDIKEMNEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKDHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKITSFEQDLRRSAAENGALSRSLQERSNMLIKLSKEKACAEAEVEHLKSTIESCEREINSLKYELHVASKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGESRLRKSPVKPATPNSSPLPEFSLENVQNFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRSTCAKTLSKLQSLEAQLQTSNQQNGTPRSNMHVTHESIYSQNASIAPSLVSMSEDGNDDAASCAESWSTTMASGLSQVSKRCTEESNKSEAIQKLELMDDFLEVEKLARLSIDSNTVSLSSNNKATDVVTNDVSQVGTGTVGLSETNGDSNPLPNQVSSSALINAPDPQSDVGGLLAKLRSRILLVFESIAKDADIGKIIEDIKHVLEDSCDSRDIAVHNSVGFISQDVQPSDATCDRQNNPEDAGLNLEKETISSLQPKEYVQITSDLDAAISHIHDFVLLLGKEANSFHDISSDGNEMSQKIEEFSVTFSKVLCSNASLLQFVLDLSYVLAKASELRFNVLGYKGTETETNSLDCIDKIALPENKLVQDNSSGERYQNGCSRVLNPCSDPEVPDDGNLVLGYGANAASQKMSSEEFEELKLEKEKVTTDLSICTENLEVAKSQLLETEQLLAEVKSQLASSERSNSLAETQLKCMAESYKSLETRAQEFETELNHLQSKIETLENELQDEKRAHEAALVKSKELEEQLLRIESSTAENDAKYTQERDLAAAADKLAECQETIFLLGKQLNALHPQSQPIESPYNNTSPNTTSSPNLQEVGQLEMDSATSSFVQRLSSDSPLHFSNGLFVPSDNDTNVPARSPAPLPKSKPKHRPTKSASSSTSSATTPEKHGRGFSRFFSSKGKPAY* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4254 1096 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 81 - -
Mtr3g4254 1096 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 83 1094 - -
Mtr3g4254 1096 SUPERFAMILY Tropomyosin 52 277 - -
Mtr3g4254 1096 Pfam Filament-like plant protein, long coiled-coil 111 986 IPR008587 -
Mtr3g4254 1096 Gene3D - 44 133 - -
Mtr3g4254 1096 Coils Coil 52 114 - -
Mtr3g4254 1096 Coils Coil 157 191 - -
Mtr3g4254 1096 Coils Coil 846 873 - -
Mtr3g4254 1096 Coils Coil 410 430 - -
Mtr3g4254 1096 MobiDBLite consensus disorder prediction 343 362 - -
Mtr3g4254 1096 PANTHER FILAMENT-PLANT-LIKE PROTEIN 83 1094 - -
Mtr3g4254 1096 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 81 - -
Mtr3g4254 1096 MobiDBLite consensus disorder prediction 1064 1079 - -
Mtr3g4254 1096 MobiDBLite consensus disorder prediction 1035 1096 - -
Mtr3g4254 1096 Coils Coil 368 395 - -
Mtr3g4254 1096 Coils Coil 881 936 - -
Mtr3g4254 1096 MobiDBLite consensus disorder prediction 984 1005 - -
Mtr3g4254 1096 Coils Coil 197 217 - -
Mtr3g4254 1096 Coils Coil 232 308 - -
Mtr3g4254 1096 SUPERFAMILY Tropomyosin 823 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4254 Mtr-Chr3 56394042 56399516 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4254 3 56394042 56399516 Mtr3g4254 3 56394042 56399516 ECH
Mtr1g0699 1 7923836 7929042 Mtr3g4254 3 56394042 56399516 PCT