Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4252 ATGGGTTCTGTTTCTTTGAAAATTGGTGATGGAACAGCAAGATTCAAAAAATCAACACTTTGTTCTTCAGCTGTTAACATTCTCATGATCTTATCCGTTATCACAACCAATCTTTTTGCTCTTTATGCTTTCACTTCTTCTCCAAAAAACAACCAAACCGAACAACTTCACCAAGTACACAAAAACTTCTCTCTCATCTCAGAACAAGTTTCACTTATACTCAGAGAAATTGATCAATCTCAAAAGAAACTAACCCAGATTGAAAAACAGCTTCTTGGTTATGAAAGTTTTGATCTTTCAAGACCCAACATTGCAAAAGAGCTTAAACTCTTTCTCAACCCTCATAAACTTCCTTTGGGTAAAGATTCCAAGACTGGAATGACTGAAATGGTTTCATCTGTGGGTCATTCTTGTGAGAAATCTTCTGATTTGTTGTCTCAGTATATGAATTACAAAGTGTTTGGAAATTGTCAAGATGATTGGAGTTTTGCACAGAAATTGATTTCGAAAAGGTGTGAGCCTTTACCTAGAAGAAGGTGTTTTGCTAAATCTGTTTCTTCTAAGGTAAATTATCTTCATCCTTTTCCAACTTCACTTTGGAAGCCTGTTAGTAACAAAACTGTTAATTGGAGTGGTTTTAGTTGTAAGAATTTTGAGTGTTTGAATGGTAAGAAATTGAATAGAGGTTGCATGCATTGCTTTGATTTGGTTAATGGGTATGAGAATCAAAGGTTTGTTAAGTCTAGAAGTAAGAATGATTTTCTTGTTGATGATGTTTTGGCATTAGGAAATGGTGGAATTAGAATAGGATTTGATATTGGAATTGGTTCTGGATCTTTTGCTGCTGTAATGGCTGAAAGGAATGTTACAATTGTTACTAGTACTCTTAATATTGATGCTCCTTTCAATGAATTTATAGCTGCAAGAGGACTTTTTCCTCTTTTCTTAAGCTTGGATCATAGGTTTCCTTTTTATGATAATGTGTTTGATTTGGTTCGTGCTACAAATACCTTGGATGATGATGTTGGTAAAAAACAAGAGAAGTTGGAGTTTTTAATGTTCGATGCTGATCGAATTTTGCGGGCTGGTGGTTTGTTTTGGATTGATAACTTCTATTGTGCTAATGAAGAGAAGAAAATTGCATTGACAAGGTTGATTGAAAGGTTTGGATATAGAAAATTGAAATGGGTTGTGGGAGAGAAAGTTGATAGTGGTAAGTCTCAAGTTTTCTTATCGGCTGTTCTTCAGAAGCCTGTTAGGGTGTAA 1266 0.3476 MGSVSLKIGDGTARFKKSTLCSSAVNILMILSVITTNLFALYAFTSSPKNNQTEQLHQVHKNFSLISEQVSLILREIDQSQKKLTQIEKQLLGYESFDLSRPNIAKELKLFLNPHKLPLGKDSKTGMTEMVSSVGHSCEKSSDLLSQYMNYKVFGNCQDDWSFAQKLISKRCEPLPRRRCFAKSVSSKVNYLHPFPTSLWKPVSNKTVNWSGFSCKNFECLNGKKLNRGCMHCFDLVNGYENQRFVKSRSKNDFLVDDVLALGNGGIRIGFDIGIGSGSFAAVMAERNVTIVTSTLNIDAPFNEFIAARGLFPLFLSLDHRFPFYDNVFDLVRATNTLDDDVGKKQEKLEFLMFDADRILRAGGLFWIDNFYCANEEKKIALTRLIERFGYRKLKWVVGEKVDSGKSQVFLSAVLQKPVRV* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4252 421 Coils Coil 70 90 - -
Mtr3g4252 421 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 1 421 - -
Mtr3g4252 421 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 264 369 IPR004159 GO:0008168
Mtr3g4252 421 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 1 421 - -
Mtr3g4252 421 Gene3D Vaccinia Virus protein VP39 238 410 IPR029063 -
Mtr3g4252 421 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 239 378 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4252 Mtr-Chr3 56371575 56373270 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4252 3 56371575 56373270 Mtr3g4252 3 56371575 56373270 ECH
Mtr1g0695 1 7832848 7834624 Mtr3g4252 3 56371575 56373270 PCT