Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4247 ATGACTCATTCACTTTTCCCCATTCATCTTCTTATCCCTCTCATTATTATAATATCAACCACCTTCACCATTCCATCTCCAGCTATAGCCGCTGGTGGACAATGGCAGCTCTTACAAAACAACATTGGCATTGTAGCCATGCATATGCAATTACTACACAACGACCGTGTCATCATTTTTGACCGTACAGATTTTGGCTTCTCAAACTTATCTTTACCCAACGGTAGATGCCGTGTTAACCCACAAGAGCAAGCTGTGAAAAATGATTGCACTGCTCACTCCCTTGAATATGACGTCTTTTCTAATACATTCCGACCACTCTTCATCCAAACCAACATCTGGTGTTCCTCCGGTTCCGTCAATCCCAACGGAACTCTTATCCAAACCGGTGGTTTCAACGATGGAGACCGTAGCGTTAGAACCTTCAATCCATGTCCAAATTGTGATTGGCAAGAATTCAACGCCAGCCTCTCAGCCAGAAGATGGTATGCGACCAATCACAAGCTACCAGATGGAAGACAAATTATCATTGGAGGAAGAAGACAATTCAACTATGAGTTTTATCCAAAGAAAGATGCTACAGCAAAGAACACATACAGTTTACCATTTCTTGTACAAACAAATGATGCAAGCGCTGAGAACAATCTTTACCCGTTTGTTTTTCTCAATGTAGATGGAAATCTTTTCATCTTTGCAAATAACCGTGCTATTTTGTTTGATTATAACAGCAACAAGGTTGTTAAAACGTACCCTACAATACCAGGTGGAGATCCTAGAAGTTATCCTAGTTCAGGTTCTGCGGCTTTGCTTCCTCTAAGAAACTTACAAAACCCTTTAGTTGAAGCTGAGGTAATGATTTGTGGTGGAGCTCCAAAAGGTTCTTATGAAAAAACATTACAAGGTAGTTTTATCGGAGCTTTGAATACATGTGGTCGGCTAAAAATAACCGACCCGAATCCGAGTTGGGTTATGGAAACTATGCCAGGTGGAAGAGTTATGAGTGACATGATTTTACTTCCTAACGGCGACGTTTTGTTGATTAATGGTGCAGCTGTGGGGTCTGCTGGTTGGGAATCGGGTCGTAATCCGGTTTTGAATCCGTTTCTTTATAAACCAAATAGTTTAGTTGGGTCAAGATTTCAGTTACAAAAACCTTCTGATATTCCACGAATGTACCATTCAACTGCTGTTTTGCTACGAGACGGTAGGGTTCTTGTTGCCGGTAGCAACCCTCATGTAAATTACAATTTTACTCGTTTGTTTCCAACTGAACTTCGGTTAGAAGCGTTTTCACCTTCGTATTTAGAGTTGGGATTCAATGATGTGCGTCCTATAATGGTGTTTCCTGCACCCCAATCACAAACGAAATTGAAATACGCTCAAAAATTGAAGGTTCGGTTTCAAGTGAAGGCAACATTGATGAAAAACATGGTGTCAGTGACAATGTATGCACCGTCTTTTAACACGCATTCTTTCTCAATGAATCAAAGGTTGTTGGTGCTTGATGAATTGAGTAGTAGTAAAAATGTTGTTGGAGAATCGACATCAACATACCAAGTTGAAGTGGCAATACCAAATTCACCCATTCTTGCACCTCCGGGATATTATTTACTATTTGTGGTCCATCAAGAAGTTCCAAGTCAGGGTGTTTGGGTCCAACTACTCTAA 1668 0.4071 MTHSLFPIHLLIPLIIIISTTFTIPSPAIAAGGQWQLLQNNIGIVAMHMQLLHNDRVIIFDRTDFGFSNLSLPNGRCRVNPQEQAVKNDCTAHSLEYDVFSNTFRPLFIQTNIWCSSGSVNPNGTLIQTGGFNDGDRSVRTFNPCPNCDWQEFNASLSARRWYATNHKLPDGRQIIIGGRRQFNYEFYPKKDATAKNTYSLPFLVQTNDASAENNLYPFVFLNVDGNLFIFANNRAILFDYNSNKVVKTYPTIPGGDPRSYPSSGSAALLPLRNLQNPLVEAEVMICGGAPKGSYEKTLQGSFIGALNTCGRLKITDPNPSWVMETMPGGRVMSDMILLPNGDVLLINGAAVGSAGWESGRNPVLNPFLYKPNSLVGSRFQLQKPSDIPRMYHSTAVLLRDGRVLVAGSNPHVNYNFTRLFPTELRLEAFSPSYLELGFNDVRPIMVFPAPQSQTKLKYAQKLKVRFQVKATLMKNMVSVTMYAPSFNTHSFSMNQRLLVLDELSSSKNVVGESTSTYQVEVAIPNSPILAPPGYYLLFVVHQEVPSQGVWVQLL* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4247 555 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 25 554 - -
Mtr3g4247 555 Pfam Glyoxal oxidase N-terminus 47 289 IPR009880 -
Mtr3g4247 555 Gene3D Immunoglobulins 443 555 IPR013783 -
Mtr3g4247 555 PANTHER SECRETED PROTEIN-RELATED 25 554 - -
Mtr3g4247 555 SUPERFAMILY E set domains 439 554 IPR014756 -
Mtr3g4247 555 CDD E_set_GO_C 438 554 IPR015202 -
Mtr3g4247 555 SUPERFAMILY Galactose oxidase, central domain 95 435 IPR011043 -
Mtr3g4247 555 Pfam Galactose oxidase-like, Early set domain 454 553 IPR015202 -
Mtr3g4247 555 Gene3D - 29 438 IPR037293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4247 Mtr-Chr3 56331086 56333317 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4247 3 56331086 56333317 Mtr3g4247 3 56331086 56333317 ECH
Mtr3g4247 3 56331086 56333317 Mtr1g0679 1 7640404 7642740 PCT