Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4222 ATGGCAGCAGAAGAGGGACACGTGATCGGAGTTCACACTGTGGAGGCTTGGAAGGAACACCTCGAGAAGGGAAATGGATCCAAGAAACTGATTGTAGTTGATTTCACTGCTTCTTGGTGTGGCCCGTGCCGTTTCATTGCCCCAATTTTGGCAGAGATTGCTAAAAAGCTGCCAAATGTCACCTTCCTCAAGGTTGATGTTGATGAATTGAAGACTGTTGCTGAGGAGTGGGCAGTTGATGCTATGCCAACATTCCTGTTCTTGAAAGAAGGAAAACTTGTGGACAAGGTTGTCGGTGCTCAGAAGGAGCAGCTGCAAGCAGCAATAACCAAGCATGCAACTACTGATGCTTGA 354 0.4746 MAAEEGHVIGVHTVEAWKEHLEKGNGSKKLIVVDFTASWCGPCRFIAPILAEIAKKLPNVTFLKVDVDELKTVAEEWAVDAMPTFLFLKEGKLVDKVVGAQKEQLQAAITKHATTDA* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4222 117 Pfam Thioredoxin 11 110 IPR013766 -
Mtr3g4222 117 Gene3D Glutaredoxin 1 116 - -
Mtr3g4222 117 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Mtr3g4222 117 PANTHER THIOREDOXIN 3 116 - -
Mtr3g4222 117 PANTHER THIOREDOXIN 3 116 - -
Mtr3g4222 117 TIGRFAM thioredoxin: thioredoxin 25 112 IPR005746 GO:0015035
Mtr3g4222 117 SUPERFAMILY Thioredoxin-like 5 113 IPR036249 -
Mtr3g4222 117 PRINTS Thioredoxin family signature 31 39 - -
Mtr3g4222 117 PRINTS Thioredoxin family signature 39 48 - -
Mtr3g4222 117 PRINTS Thioredoxin family signature 78 89 - -
Mtr3g4222 117 CDD TRX_family 19 109 - -
Mtr3g4222 117 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4222 Mtr-Chr3 56087617 56089668 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4222 3 56087617 56089668 Mtr3g4222 3 56087617 56089668 ECH
Mtr1g0661 1 7423249 7425377 Mtr3g4222 3 56087617 56089668 PCT