Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4221 ATGAACGCTACTTCAGTTTCAAAGCTACTCCTTGTAGTAGTTACAACATTGTTTGTTTTGTTTTTGGGTTGTCATAGCAAAGTTACATACGATAGAAAGTCTCTTCTCATCAATGGCCAAAGAAGAATCCTAATTTCTGGTTCCATTCACTATCCTAGAAGCACCCCTGAAATGTGGGAAGATCTAATTAGGAAAGCCAAACATGGTGGTCTTGATGTTATAGACACTTATGTCTTCTGGGATGTTCATGAACCATCTCCTAGCAATTACAATTTTGAAGGAAGATATGATTTAGTAAGGTTTATTAAGACAGTGCAAAAAGCGGGGCTTTATGCCAATCTTCGCATTGGACCTTATGTATGCGCTGAGTGGAACTTTGGAGGAATTCCTGTTTGGTTGAAGTATGTGCCCGGGATAAGCTTCAGAACGGATAATGGGCCTTTCAAGGCTGCAATGCAAGGTTTTACTCAGAAGATTGTCCAAATGATGAAGAGTGAAAAGTTGTTTCAGTCTCAGGGTGGTCCAATAATTCTTTCTCAGATTGAGAACGAATACGGACCAGAGAGCAGGGCAACAGGAGCTGCTGGTCATGCATACCTAAACTGGGCTGCAAATATGGCTGTTGGATTGGGAACAGGAGTCCCTTGGGTGATGTGCAAGGAAAATGATGCCCCAGATCCTGTGATTAATTCATGTAATGGTTTTTACTGTGATGATTTCTCTCCAAATAAACCATATAAGCCTAGCATGTGGACCGAGTCTTGGAGTGGCTGGTTTACAGATTTTGGTGGCCCAATTCACCAGCGACCAGTTCAGGATCTAGCATTTGCAGTTGCTCGTTTCATTCAGAAGGGTGGCTCGTATGTGAATTACTACATGTACCATGGAGGAACCAATTTTGGACGATCAGCTGGGGGTCCATTCATTTCTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGGTCAGGCATCCAAAATATAGTCATTTGAAGGAGCTTCATAAAGCTATCAAGCAATGTGAGCATGCTTTGGTTTCATCGGATCCTACTGTTACACCATTAGGAACACTTCAGCAGGCTCATGTATTCTCTGCAGGAACTACAGGATGTGCAGCTTTTCTAGCAAACTATCATCTAAAGTCTGCTGCTACTGTGGTTTTCAATAGCAGGCACTATGACTTGCCTCCATGGTCCATAAGCATCCTTCCTGATTGCAGAACTTCCGTATTTAATACTGCAAATGTGGGAACTCAAACGTCAGTGGTAAAAATGCGTCCTGTCGATTCTAGGTTCTCATGGGAGACCTATGATGAAGATCTATCTTCTCTAGACGAAAGTTCAAGGATTACAGCTGCTGGACTCTTAGAACACCTCAATGTTACAAGAGACACCAGCGACTATCTATGGTACATAACCAGTGTTGACATAAGTTCATCAGAATCATTTCTTCGAGGAGGACACAAACCCAACATTAATGTGCAGTCTGCAGGACATGCCGTCCATGTGTTTGTTAACGGGCAATTTTTAGGGTCTGCATTTGGGACGAGGAAACAGAGAAGTTGCACATTTAATGGGCTAGTTAATCTACATGCTGGAGCAAATAAAATTGCTCTTCTCAGCGTGACTGTCGGATTGCCGAACGTTGGCCGACATTATGAAACATGGGAGACAGGGATCACTGGTCCAGTTGTGCTCCATGGTCTCGACCATGGACCGAAGGATTTGTCGCATAATAAATGGTCTTATCAGGTTGGACTAAAAGGAGAGGCTGTGAATTTGGTATCACCCAATGGGGTCTCAGATAATGATTGGGTTCAAGATTCACCAGCTACTCCAAGCCGGTCAGAACTAAAATGGTACAAGGCTTATTTTAACACACCTGAGGGCAACGAACCATTGGCTTTGGACCTGGGAAGTATGGGTAAGGGCCAAGTATGGATAAATGGACAGAGCATAGGAAGATTTTGGATGGCTTATGCAAAGGGTGACTGCAATTCCTGCAACTATTCTGGGACATTCAGACCTGCAAAGTGCCAACTTGGTTGTGGACAACCCACTCAAAGATGGTATCATGTTCCAAGGTCCTGGCTAAAGCCAACAAAGAACCTGATAGTAGTGTTTGAAGAACTTGGCGGGAATCCTTGGAAAATTTCGTTGGTGAAGAGAACAGTACATACTGCCGCAGCTCGTTAG 2202 0.4332 MNATSVSKLLLVVVTTLFVLFLGCHSKVTYDRKSLLINGQRRILISGSIHYPRSTPEMWEDLIRKAKHGGLDVIDTYVFWDVHEPSPSNYNFEGRYDLVRFIKTVQKAGLYANLRIGPYVCAEWNFGGIPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKSEKLFQSQGGPIILSQIENEYGPESRATGAAGHAYLNWAANMAVGLGTGVPWVMCKENDAPDPVINSCNGFYCDDFSPNKPYKPSMWTESWSGWFTDFGGPIHQRPVQDLAFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFISTSYDYDAPIDEYGLVRHPKYSHLKELHKAIKQCEHALVSSDPTVTPLGTLQQAHVFSAGTTGCAAFLANYHLKSAATVVFNSRHYDLPPWSISILPDCRTSVFNTANVGTQTSVVKMRPVDSRFSWETYDEDLSSLDESSRITAAGLLEHLNVTRDTSDYLWYITSVDISSSESFLRGGHKPNINVQSAGHAVHVFVNGQFLGSAFGTRKQRSCTFNGLVNLHAGANKIALLSVTVGLPNVGRHYETWETGITGPVVLHGLDHGPKDLSHNKWSYQVGLKGEAVNLVSPNGVSDNDWVQDSPATPSRSELKWYKAYFNTPEGNEPLALDLGSMGKGQVWINGQSIGRFWMAYAKGDCNSCNYSGTFRPAKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRTVHTAAAR* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4221 733 PANTHER BETA-GALACTOSIDASE 3 733 - -
Mtr3g4221 733 SUPERFAMILY Galactose-binding domain-like 580 727 IPR008979 -
Mtr3g4221 733 SUPERFAMILY Galactose-binding domain-like 402 572 IPR008979 -
Mtr3g4221 733 Gene3D - 593 731 - -
Mtr3g4221 733 Pfam Glycosyl hydrolases family 35 34 339 IPR031330 -
Mtr3g4221 733 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Mtr3g4221 733 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Mtr3g4221 733 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Mtr3g4221 733 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Mtr3g4221 733 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Mtr3g4221 733 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Mtr3g4221 733 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Mtr3g4221 733 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Mtr3g4221 733 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Mtr3g4221 733 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Mtr3g4221 733 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Mtr3g4221 733 Gene3D - 409 569 - -
Mtr3g4221 733 Gene3D Glycosidases 24 344 - -
Mtr3g4221 733 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Mtr3g4221 733 PANTHER BETA-GALACTOSIDASE RELATED 3 733 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4221 Mtr-Chr3 56066124 56072131 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4221 3 56066124 56072131 Mtr8g2444 8 34897789 34903543 ECH
Mtr3g4221 3 56066124 56072131 Mtr3g4221 3 56066124 56072131 ECH
Mtr1g0660 1 7414430 7419487 Mtr3g4221 3 56066124 56072131 PCT