Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4173 ATGGAGAGATTTTATAGTTATTCTGAACAACGAGAGGGTATTCAGTTAGGATATGATGAAGATGAGAGTAGTAACAATCCGAGCACATCACAGAGGAAATCAGACGTTGATTTTAATGATGTGTTTGGGGGACCACCGCGGAGGAGGTCATCGGTGAGTGGAGGAGAGGAAGGTGAAACGGGTTGGTGTAGTTGGCCTCCTCCGCCTGAGAGCGAGAAACCAGTGTTTGGTGAGGATAGTGGAGCTAGGAGGAGAAGAAAAGGAAAAGATTTTTTTGATGATATATTTGGAGGAGAAGATTCACAGTCTCAAACTCCAAGTGGGTGTTCAACACCAAAGAGACGTGATGGTGCTGCTTTCAGTCCTGCTCTTCGACCACTTGCTTCTTCTCTCCCCCCATCCTTCAGCCTTCCTGCCATATTGGCAAAAGGAGCGGACCTTCAGACATTTGGTTCCCCTCCTAGGATTACGAATCCACTTAACAACGGCATTGCTGCTTCAAATGGATTAGACTTCTCAGACTCTCATCTATCTAGATTTTCAGCCCAACATAAAGAGTTGCAAAATGATTTTAAGCCAACTTACATGCAAAGTCTATTATCAAAGGAGTTTTCAAACTTGAGCCAATCTGATGAAGTAGACAAAGGAAACAATTTGAAAAAAGACAGATCTATTACTGAAGTTTCTCCTAATAATACCAGTAATGATAAGTTCCATTTCTCAATATATAAATGGGCAAGTAAAGGTGTGGTACCTTTGGCGATGCCTTTTAGGACAGAAAGAACCTCAAGGACAAAAGATAAGATTAAACTTGAGAAATGCTCGAGCGCTAAGGAATGGATCGTCACTGACATTACCACTCAAAATGATAGTCCTAACGAATGGATCGTCAGTGAGATTACCACACAAAATGATAGTCCTATAACATACAATGGTTCTTCTTTAAAGAGTAATAAAAAACAAGAAGTGTCAAATACTTCCACAATCAGTAAAAACAAGGTAGATTCACACCAGAGTGTAGACCATATCATTTCCGCCAAAGCTCAACCAGATTCATCGAGCAGCCGTCAAACTCTTATTAAAGATGTTCTTGGTAGTCCTATTACATATGATGCTAAAGCAGAATCAAGTACTCATTCCACAAATGAGACAGTCTTTGATGGAAAAACTGAAGCAGCAAGTGAAACTCACAAACATGAGCCCAAATCATTACATTCTCTGTTCGGTAAAAATAGTAAGAAACAAGATTATGATAAGATAACCAGAAAGTCGAGAGAAGCAAACATGGCGAAAAGCTCAAATAGTTTTGATATTCCTATGAATCCAAAGAAGGAAGATGAAAAGCAAAAGACAGTTTCTATGAGAGGTGTAGAATATAGCAAAGCTACTCCCCGAGGTTCATTAAGCCCAGGCAGAAGTATGGGAAAAGGCCGGGTTAAAGGGAAGGTCAAAGAATTTGCTCAAATATTCAATCAAGAAGCTGTAACAAAACCTAAAGTTGACACAAAATCTCGACTTCAGGGTTATAAGAAAGGAGCTGTAAAGGTGGATGATGATCCTGAACAGTCCAAAAAGGAGATCTATACTGTAGAGACCATTGATATGGCTGCCAATAATTTGTCACGGCAAGATGATATTTCAGCATCAGATAAAGAGGAGTCCTTCCATGATAATTTCACGATCGAAGTATTATCCCAAGATGAGGGTGACGTCTCACAGAACCAAGAAATTCAAGAACTCCAAGTCATTGACAAGAAGATACAACAATGGTCTAAAGGAAAGGAAGGAAATATACGCTCACTGTTGTCAACATTACAATACGTACTTTGGCCAAACTGTGGCTGGAAGCCTGTGCCTCTTGTTGATATAATTGAAGGGAACGCGGTTAAAAGATCTTATCAAAGAGCTTTACTCAGTCTGCATCCGGATAAGTTGCAGCAAAAGGGTGCTACTTCAGACCAAAAGTACACTGCAGAAAAAGTTTTTGATATTTTGCAGGAGGCATGGACTCAATTCAACATGGTTGGTGCACTCTAA 2037 0.4006 MERFYSYSEQREGIQLGYDEDESSNNPSTSQRKSDVDFNDVFGGPPRRRSSVSGGEEGETGWCSWPPPPESEKPVFGEDSGARRRRKGKDFFDDIFGGEDSQSQTPSGCSTPKRRDGAAFSPALRPLASSLPPSFSLPAILAKGADLQTFGSPPRITNPLNNGIAASNGLDFSDSHLSRFSAQHKELQNDFKPTYMQSLLSKEFSNLSQSDEVDKGNNLKKDRSITEVSPNNTSNDKFHFSIYKWASKGVVPLAMPFRTERTSRTKDKIKLEKCSSAKEWIVTDITTQNDSPNEWIVSEITTQNDSPITYNGSSLKSNKKQEVSNTSTISKNKVDSHQSVDHIISAKAQPDSSSSRQTLIKDVLGSPITYDAKAESSTHSTNETVFDGKTEAASETHKHEPKSLHSLFGKNSKKQDYDKITRKSREANMAKSSNSFDIPMNPKKEDEKQKTVSMRGVEYSKATPRGSLSPGRSMGKGRVKGKVKEFAQIFNQEAVTKPKVDTKSRLQGYKKGAVKVDDDPEQSKKEIYTVETIDMAANNLSRQDDISASDKEESFHDNFTIEVLSQDEGDVSQNQEIQELQVIDKKIQQWSKGKEGNIRSLLSTLQYVLWPNCGWKPVPLVDIIEGNAVKRSYQRALLSLHPDKLQQKGATSDQKYTAEKVFDILQEAWTQFNMVGAL* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4173 678 Gene3D DnaJ domain 574 677 IPR036869 -
Mtr3g4173 678 PANTHER J DOMAIN-CONTAINING PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1 9 672 - -
Mtr3g4173 678 MobiDBLite consensus disorder prediction 390 426 - -
Mtr3g4173 678 MobiDBLite consensus disorder prediction 374 389 - -
Mtr3g4173 678 SUPERFAMILY Chaperone J-domain 571 672 IPR036869 -
Mtr3g4173 678 MobiDBLite consensus disorder prediction 308 337 - -
Mtr3g4173 678 MobiDBLite consensus disorder prediction 374 478 - -
Mtr3g4173 678 MobiDBLite consensus disorder prediction 76 96 - -
Mtr3g4173 678 MobiDBLite consensus disorder prediction 308 334 - -
Mtr3g4173 678 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 9 672 - -
Mtr3g4173 678 MobiDBLite consensus disorder prediction 19 36 - -
Mtr3g4173 678 MobiDBLite consensus disorder prediction 440 454 - -
Mtr3g4173 678 MobiDBLite consensus disorder prediction 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4173 Mtr-Chr3 55645965 55651450 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4173 3 55645965 55651450 Mtr3g4173 3 55645965 55651450 ECH
Mtr1g0637 1 7206650 7213049 Mtr3g4173 3 55645965 55651450 PCT