Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4171 ATGGCTTCTGACGGAGCAACTTCGGCGGCGAATTCAAGTCGTCGGAAGCCGTCGTGGAGGGAGAGAGAGAACAACAGGAGGAGAGAGAGACGGAGGAGAGCTATAGCGGCAAAGATTTACGCGGGATTAAGGTCTCAGGGGAATTATAATTTACCAAAACACTGTGATAACAATGAGGTCTTGAAAGCTCTTTGTGCTGAAGCTGGTTGGACTGTTGAAGAAGATGGCACCACTTATCGCAGGGGATCAAGGGCAGAAACACCAGGCGATGGTGCAGGAAATTTCAACAGAAACAACCCATTTTCATCTCAAAATCTAAGTCCTCTTTCATCATCATTTCCAAGTCCAATCCCTTCCTACCAAGTTAGCCCCTCTTCCTCTTCATTCCCGAGCCCGTCTCGTATGGATGCAAACAACAATGCATCAAATTACATTCCATATGCTCGCACCATGTTCCCCAACATGTCTCTCCCACCTTTGAGAATATCAAACAGCGCGCCCGTGACTCCACCTGTCTCATCACCAACCTCAAGAAATCCTAAACCCATGATTCCAACATGGGAATCAATTGCCAAAGCATCAGGGACATCCTTCAATCACCCTTTCTTTGCAGCTTCTGCGCCTACTAGTCCATCCCACCGGAACCTTTATACTCCACCTACTATTCCTGAATGTGATGAGTCTGATACTTCTACTGTTGAGTCTGGACAGTGGTTGAATTTCCAAGCCTTTGCAGCTTCTGCTAAATCAGTCTCTCCTACATTGAACTTTATGAAACCTGTAATTAATGAGCAGCATAACATGCTGCCTCATAACAGAATGCAGGAGATGAGGATTTCAGAGCCAGAGTTTGGGGTGCAGGTCAAGCCTTGGGTTGGGGAAAGGATTCATGAAGTGGGCTTGGATGATTTGGAGCTTACTCTTGGAAATGGAAAGGCACCTAGTTAA 948 0.4641 MASDGATSAANSSRRKPSWRERENNRRRERRRRAIAAKIYAGLRSQGNYNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRRGSRAETPGDGAGNFNRNNPFSSQNLSPLSSSFPSPIPSYQVSPSSSSFPSPSRMDANNNASNYIPYARTMFPNMSLPPLRISNSAPVTPPVSSPTSRNPKPMIPTWESIAKASGTSFNHPFFAASAPTSPSHRNLYTPPTIPECDESDTSTVESGQWLNFQAFAASAKSVSPTLNFMKPVINEQHNMLPHNRMQEMRISEPEFGVQVKPWVGERIHEVGLDDLELTLGNGKAPS* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4171 315 MobiDBLite consensus disorder prediction 92 135 - -
Mtr3g4171 315 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 143 IPR008540 -
Mtr3g4171 315 MobiDBLite consensus disorder prediction 1 31 - -
Mtr3g4171 315 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 313 - -
Mtr3g4171 315 MobiDBLite consensus disorder prediction 15 30 - -
Mtr3g4171 315 MobiDBLite consensus disorder prediction 77 135 - -
Mtr3g4171 315 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 313 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4171 Mtr-Chr3 55637688 55639850 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Mtr3g4171 BES1_N 2.6e-57 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4171 3 55637688 55639850 Mtr3g4171 3 55637688 55639850 ECH
Mtr1g0590 1 6791446 6793708 Mtr3g4171 3 55637688 55639850 PCT