Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4169 ATGGAGCTAATTATTCGGAGAACTTCATCTTTCAATTCGAAGATTAGATTCATTCTACTTGTTTTTCAGATCATATTGATATTGGCATTGGTGGAAGCCCACAATGCACATCCCCATGAAGACCAACTTCAATGGGGAGGTTTGGAAAGGAATACAAACAACATTGTCTCACACTCTTGCATACATGACCAGATTCTTGAACAGAGAAAGCGACCTGGTCGCAAGATTTATTCGGTTACCCCACAGGTTTACGAGCCTGGTCGACTGAAGCCCCTTCAGAATAAAGGTAGGACAATTCTTGAAGTGTCAACATCATCAGAGTCTCAGAATGATGTGAAGGAACCTATTAGGATATATCTAAATTATGATGCTGTTGGCCACTCCCCTGACAGAGATTGTCGAAAAGTCGGTGCTGTTGTTAAACTTGGAGAGCCTCCCACAACTTCTCTTCCTGGTTCCCCTTTTTGCAATCCTCACGGTAACCCTCCAATTGTTGGCGATTGTTGGTACAACTGCACTTCTGAAGATATCTCAGGTGAAGACAAAAAGCGCCGCCTTCGTAAGGCATTAGGTCAGACTGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAAGGGGAACTTGCGGTTAAGTGGATATTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCTCGTGGATATATCGAGGAAGGTGTCCCTGATGCCGACTTGGTTCTTTTGGTAACTACAAGACCTACAACTGGAAATACACTTGCTTGGGCAGTGGCATGTGAACGGGATCAATGGGGCCGTGCTATAGCTGGACATGTGAATGTTGCTCCTCGCCATTTGACTGCTGAGGCAGAGACTTTGCTTTCAGCTACTCTAATACACGAGGTTATGCATGTTCTTGGTTTTGACCCACATGCCTTTGCTCATTTTAGAGATGAAAGAAAAAGACGGCGTGATCAGGTTACAGAACAAGTAATGGATGAAAAGCTTGGACGGATGGTCAATCGAGTGGTGCTTCCCCGTGTTGTCATGCATTCACGATATCATTATGCGGCATACTCTGGAAATTTTACTGGCTTAGAACTGGAAGACGGGGGAGGACGCGGCACATCAGGGTCTCATTGGGAGAAAAGGCTTCTGATGAATGAGATTATGACCGGTTCCGTGGATACAAGATCTGTAGTTTCAAAAATGACGTTGGCTCTCTTAGAAGACAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCGTCTTGATTGGGGTCGCAACCAAGGTACTGAATTTGTTACCTCCCCTTGCAATCTTTGGAAGGGAGCTTATCATTGCAACACAACACAATATTCTGGCTGTACATATAACAGAGAGGCAGAGGGATACTGCCCAATCCTAACATATAGTGGAGACCTACCTCAGTGGGCACAATATTTTCCACAAGCTAATAAAGGTGGACAATCCTCATTAGCTGATTATTGCACCTATTTTGTTGCGTACTCTGATGGATCATGTACAGACACTAATAGTGCACGAGCACCTGATAGAATGCTTGGTGAAGTCAGAGGAAGTAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACGTGGTTCTATGACCCAGGGCAATGGTTGTTATCAGCACAGATGTATAAACAGTTCTTTAGAGGTTGCTGTGGATGGTATCTGGAAAGTGTGTCCTCATGCTGGTGGAGCTATTCTGTTCCCTGGCTTTAATGGTGAATTAATCTGCCCTGCATATCCAGAGCTCTGTAACTCTGACCCAGTATCTGTGTCCGGTCAATGCCCCAATTCATGTAATTTCAATGGAGATTGTGTCGATGGAAGATGCCGCTGCTTTCTTGGATTTCATGGACATGATTGCAGTAGACGTTCTTGCCCCGGCAATTGCAATGGTAATGGCATGTGCCTTTCCAATGGGATCTGTGAATGTAAAACTGGCTACACCGGCATCGACTGTTCCACTGCTGTGTGTGATGAGCAATGCAGCCTTCATGGTGGGGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCCGGATACACATGCCAGAACAGCTCCATGCTCCTATCTAGTCTCTCAGTTTGCAAAAATGTACTGGTAAATGATGTATCTGGTCAGCATTGTGCACCCAGCGAGCCTAGCATACTGCAGCAGTTGGAAGAAGTAGTTGTTATGCCAAATTACCACCGATTATTCCCTGGGGGTGCTAGGAAGTTGTTTAATATATTTGGCAGCACCTACTGTGATGAGGCTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGACAAGGATGGAGACAACAGACTTCGGGTATGCCATTCCGCATGCCAATCTTATAATATAGCATGTGGAGCTTCACTTGAGTGCTCTGACCAAACCCTCTTTAGCAGTGAGGGCGAGGGGGAGGGTCAGTGCACCGGATTTGGGGAGATGAAATTGTCATGGTTTAGTCGCCTGCGAAATGGTTTTTCTTTGAGAAATAATAGTTCTTTAAAAGGAATGTCTGTAAGATATAGGAAGCTTTAA 2574 0.453 MELIIRRTSSFNSKIRFILLVFQIILILALVEAHNAHPHEDQLQWGGLERNTNNIVSHSCIHDQILEQRKRPGRKIYSVTPQVYEPGRLKPLQNKGRTILEVSTSSESQNDVKEPIRIYLNYDAVGHSPDRDCRKVGAVVKLGEPPTTSLPGSPFCNPHGNPPIVGDCWYNCTSEDISGEDKKRRLRKALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVPDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRDQVTEQVMDEKLGRMVNRVVLPRVVMHSRYHYAAYSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYHCNTTQYSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARAPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINSSLEVAVDGIWKVCPHAGGAILFPGFNGELICPAYPELCNSDPVSVSGQCPNSCNFNGDCVDGRCRCFLGFHGHDCSRRSCPGNCNGNGMCLSNGICECKTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLVNDVSGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNIACGASLECSDQTLFSSEGEGEGQCTGFGEMKLSWFSRLRNGFSLRNNSSLKGMSVRYRKL* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4169 857 PRINTS Leishmanolysin (M8) metalloprotease family signature 244 273 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mtr3g4169 857 PRINTS Leishmanolysin (M8) metalloprotease family signature 397 426 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mtr3g4169 857 ProSiteProfiles EGF-like domain profile. 631 663 IPR000742 -
Mtr3g4169 857 Pfam Leishmanolysin 170 595 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mtr3g4169 857 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 111 599 - -
Mtr3g4169 857 Gene3D - 594 634 - -
Mtr3g4169 857 Pfam EGF-like domain 635 662 IPR013111 -
Mtr3g4169 857 ProSitePatterns EGF-like domain signature 2. 651 662 IPR000742 -
Mtr3g4169 857 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 9 828 - -
Mtr3g4169 857 Gene3D - 109 299 - -
Mtr3g4169 857 Gene3D Leishmanolysin , domain 2 309 434 - -
Mtr3g4169 857 ProSitePatterns EGF-like domain signature 1. 651 662 IPR000742 -
Mtr3g4169 857 Gene3D Laminin 635 665 - -
Mtr3g4169 857 Gene3D Leishmanolysin domain 4 498 593 - -
Mtr3g4169 857 Gene3D Leishmanolysin domain 3 438 496 - -
Mtr3g4169 857 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 9 828 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4169 Mtr-Chr3 55593809 55601580 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4169 3 55593809 55601580 Mtr3g4169 3 55593809 55601580 ECH
Mtr1g0586 1 6737553 6745564 Mtr3g4169 3 55593809 55601580 PCT