Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4166 ATGCAATCCAACCCAAAACCACCATTTCTATTCTTATATCTCATCCTTTTTTTTTTCTTTCTACCATGTTTATCATCTACCATCACCCATCAATTCAAAGAAGCTCCTGAATTCTACAATTCCCCAAAATGCCCTTCCATTACCGACACTTCAAAATCAACAGTAGTCCAAGTAGCAATGACACTCGACACAACATATATCCGAGGATCCATGGCAGCAATCTTATCAATCCTCCAACATTCATCATGTCCACAAAACATATTCTTCCACTTCGTTTGTTCATCAAACGCGTTCAATCTACGCGCCGCAATCATAACCTCCTTCCCCTACCTCAAATTCCATCTCTACACCTTTGATGACACTACGGTCACCGGACTCATCTCAACCTCCATTCGTTCAGCTCTTGATTGTCCTCTCAACTACGCTCGTAGCTACTTACCAAGTCTCTTACCACTTTCCGTTAACCGCGTTGTTTATCTTGATTCAGATCTTATTCTTGTTGATGACATTGCAAAATTAGCAGAAACACCTTTAGGAGAAAACTCTGTTTTAGCAGCACCTGAATATTGTAACGCAAATTTCAGTTCTTATTTTACTCCATCGTTTTGGTCTAATCCTTCTTTGTCTCTCACTTTTGCGAATCGAAAGCCTTGTTATTTCAACACGGGTGTGATGGTGATTGATTTGGAACGATGGAGAGAAGGGGATTATACTGCAAAGATTGAGGATTGGATGGAGTTGCAGAAGAGGATGAGGATCTATGAATTGGGTTCGTTGCCGCCGTTTTTGCTTGTTTTTGCCGGGAATATTGCTCCGGTGGATCATAGGTGGAATCAACATGGACTTGGTGGTGATAATTTTCGTGGTCTTTGTAGAAATCTTCATCCCGGTCCTGTGAGTTTGTTGCATTGGAGTGGGAAAGGTAAACCTTGGGTTAGATTGGATGCTAGTAGGCCTTGTCCTTTGGATGCACTTTGGGCACCCTATGATCTGTTACAAACTCCATTTTCTTTTGATTCTTGA 1023 0.4145 MQSNPKPPFLFLYLILFFFFLPCLSSTITHQFKEAPEFYNSPKCPSITDTSKSTVVQVAMTLDTTYIRGSMAAILSILQHSSCPQNIFFHFVCSSNAFNLRAAIITSFPYLKFHLYTFDDTTVTGLISTSIRSALDCPLNYARSYLPSLLPLSVNRVVYLDSDLILVDDIAKLAETPLGENSVLAAPEYCNANFSSYFTPSFWSNPSLSLTFANRKPCYFNTGVMVIDLERWREGDYTAKIEDWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNFRGLCRNLHPGPVSLLHWSGKGKPWVRLDASRPCPLDALWAPYDLLQTPFSFDS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4166 340 Pfam Glycosyl transferase family 8 58 313 IPR002495 GO:0016757
Mtr3g4166 340 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 25 340 - -
Mtr3g4166 340 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 57 319 IPR029044 -
Mtr3g4166 340 SUPERFAMILY Nucleotide-diphospho-sugar transferases 57 331 IPR029044 -
Mtr3g4166 340 PANTHER HEXOSYLTRANSFERASE 25 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4166 Mtr-Chr3 55571706 55573487 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4166 3 55571706 55573487 Mtr3g4166 3 55571706 55573487 ECH
Mtr1g0580 1 6692116 6693706 Mtr3g4166 3 55571706 55573487 PCT