Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3714 ATGGAAGGAACTTTCAATTTCAACGATAATTCCTCTTCCGCTTTCAGCGACTGCGACAGTGACAGATCCACCGAATTCACCACTACAACTGAAAACAGAATCCAACGTCTTCTCATTACATGCGCTTCCGATAATTATTCCGACGAACTCATTCGCCGGTTGATTCTCGATCTCAATTCCTCTTCCATTGATCAACAAAAACAAGCTACAATGGAAATCAGATTACTTGCCAAAAACAAATCAGAAAATCGTCTCAGAATCGCAAAAGCCGGCGCTATCAAACCGTTGATTTCACTTTTATCATCACAGTCACCGGTGATGGATCTTCAACTGCAAGAATACATCGTGACAGCGATTTTAAATCTATCACTGTGTGATGAAAATAAAGAGATTATCACTTCTTCTGGTGCGATTAAACCTATGGTAAAAGCTTTGAAAACAGGCACTCCAACGGCGAAAGAGAATGCAGCATGTGCTCTACTTCGTCTCTCACAGACAGAAGAGAATAAAGGAGCAATTGGAAGATGTGGTGCAATTCCGGCATTGGTGAACCTTCTAGAAAACGGAGGAATCCGCGGGAAAAAGGATGCGTCAACGGCTTTATACTCGCTGTGTTCGGTGAACGAGAACAAAATCAGAGCGATAAAAGCTGGAATAATGAAGCCTTTAGTTGAATTAATGGCGGATTTTGATTCGAACATGGTGGATAAGTCAGCGTATGTGATGAGCGTGTTGGTGACGGTTACGGAGGCGAGAACGGCTTTGGCGGAGGAAGGAGGGATACCGGTGTTGGTGGAGATTGTGGAGGTTGGGACGCAGAGACAGAAGGAAATTGCGGCGGCGATTTTGTTGAAGATTTGTGAAGAGAATGTGAGTTATCGTGTAATGGTGTGTCGTGAAGGTGCTATTCCTCCTTTGGTTTGTCTTTCTCAGTCCGGTACCATTCGCGCCAAGCACAAGGTGGAGACACTAATAGAGCTTCTACGGCAACCAAGATCTAGCAATGCCACTGTACGTGCCTCATAA 1026 0.4444 MEGTFNFNDNSSSAFSDCDSDRSTEFTTTTENRIQRLLITCASDNYSDELIRRLILDLNSSSIDQQKQATMEIRLLAKNKSENRLRIAKAGAIKPLISLLSSQSPVMDLQLQEYIVTAILNLSLCDENKEIITSSGAIKPMVKALKTGTPTAKENAACALLRLSQTEENKGAIGRCGAIPALVNLLENGGIRGKKDASTALYSLCSVNENKIRAIKAGIMKPLVELMADFDSNMVDKSAYVMSVLVTVTEARTALAEEGGIPVLVEIVEVGTQRQKEIAAAILLKICEENVSYRVMVCREGAIPPLVCLSQSGTIRAKHKVETLIELLRQPRSSNATVRAS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3714 341 SUPERFAMILY ARM repeat 46 332 IPR016024 -
Mtr3g3714 341 Gene3D - 195 337 IPR011989 -
Mtr3g3714 341 Gene3D - 15 194 IPR011989 -
Mtr3g3714 341 MobiDBLite consensus disorder prediction 1 26 - -
Mtr3g3714 341 SMART arm_5 248 288 IPR000225 GO:0005515
Mtr3g3714 341 SMART arm_5 125 165 IPR000225 GO:0005515
Mtr3g3714 341 SMART arm_5 166 206 IPR000225 GO:0005515
Mtr3g3714 341 SMART arm_5 80 124 IPR000225 GO:0005515
Mtr3g3714 341 SMART arm_5 207 247 IPR000225 GO:0005515
Mtr3g3714 341 Pfam Armadillo/beta-catenin-like repeat 81 123 IPR000225 GO:0005515
Mtr3g3714 341 Pfam Armadillo/beta-catenin-like repeat 126 164 IPR000225 GO:0005515
Mtr3g3714 341 Pfam Armadillo/beta-catenin-like repeat 167 206 IPR000225 GO:0005515
Mtr3g3714 341 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 91 137 IPR000225 GO:0005515
Mtr3g3714 341 PANTHER U BOX DOMAIN-CONTAINING 9 336 - -
Mtr3g3714 341 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 9 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3714 Mtr-Chr3 50924411 50929295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3714 13 336 U-box Gene Family AT2G23140 44.880 1.61e-81 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0455 1 5272198 5274642 Mtr3g3714 3 50924411 50929295 PCT