Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3684 ATGGAGACTCCTGCTTCAAAGAAGAGGGCTAACGCTGAACCAATTGTTCTTAACAATAAGAAACAAAGGGTTGTTTTGGGTGATCTTCCCAATTTACCAAATCTCAATGTTTCTCCCAAACCCCAAACTCAGAAGAAACTTAGGCCAAAGAAATCTGATGCTGTCCGTTTGGTTTATGGTTTCAATTTTGATAAACCAGATTTCAGCAAAATCAATGCAAAATCTGATTATGAAGAGATTTTTGAGTCTTATGCATCTGATATCTCCAACTATCTTCGCACAATGGAGGTTCAGAAAAAGAGAAGACCAATGATTGGTTATATTGAGAAAGTTCAAAGAGGTGTTACTGCTAATATGAGAGGGATACTGGTTGATTGGTTGGTTGAGGTTGCTGAAGAATACAAGCTTCTCCCTCAAACCCTTCATCTTGCTGTTTCATACATTGACAGATTCCTGTCCAATGAGTCTGTCAACAGATCTAAGCTTCAATTGCTTGGTGTTTCATCCATGCTCATCGCATCAAAGTATGAAGAAATCTCCCCACCAAAGGCTGTTGATTTCTGCCAGATTACTGATAACACCTATGAGCTGAAACAGGTTATTAAGATGGAAGCTGATATTCTTAAGTCATTGAATTTTGAAATGGGCAACCCTCATGTTAACACTTTTCTCAAGGAATATATTGGGCCTGCTACTGAGGATCTAAAGACTTCAAAATTACAAATGGAATTTCTGTGTAACTATCTTGCTGAGCTAAGCTTGATAGACTATGAATGTATAAGATTCTTGCCTTCTATGGTGGCTGCATCTGTTATATTTCTTGCTAGATTCATAATCTGTCCTGGAGTACATCCTTTGACCTCATCTTTGAGTGAATGCTTGTTTTACAAATCTGCTGAGTTGGAGGAATGTGTTCTGATTTTGCATGATTTGTATTTGGTAAGAAGGGCTGCATCATTGAAAGCTGTTAGGGAGAAATACAAGCAACACAAGTTCAAGAATGTGGCAAACCTTCCTTCATCTCCAGAAATACCAAATCATTACTTTGTAGAAGAGTGA 1059 0.3796 METPASKKRANAEPIVLNNKKQRVVLGDLPNLPNLNVSPKPQTQKKLRPKKSDAVRLVYGFNFDKPDFSKINAKSDYEEIFESYASDISNYLRTMEVQKKRRPMIGYIEKVQRGVTANMRGILVDWLVEVAEEYKLLPQTLHLAVSYIDRFLSNESVNRSKLQLLGVSSMLIASKYEEISPPKAVDFCQITDNTYELKQVIKMEADILKSLNFEMGNPHVNTFLKEYIGPATEDLKTSKLQMEFLCNYLAELSLIDYECIRFLPSMVAASVIFLARFIICPGVHPLTSSLSECLFYKSAELEECVLILHDLYLVRRAASLKAVREKYKQHKFKNVANLPSSPEIPNHYFVEE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3684 352 CDD CYCLIN 119 208 IPR013763 -
Mtr3g3684 352 SMART cyclin_7 226 310 IPR013763 -
Mtr3g3684 352 SMART cyclin_7 125 209 IPR013763 -
Mtr3g3684 352 CDD CYCLIN 218 309 IPR013763 -
Mtr3g3684 352 Pfam Cyclin, N-terminal domain 87 215 IPR006671 -
Mtr3g3684 352 PANTHER CYCLINS 16 349 IPR039361 -
Mtr3g3684 352 SUPERFAMILY Cyclin-like 83 215 IPR036915 -
Mtr3g3684 352 SMART Cyclin_C_2 218 341 IPR004367 -
Mtr3g3684 352 Gene3D - 87 337 - -
Mtr3g3684 352 Pfam Cyclin, C-terminal domain 219 340 IPR004367 -
Mtr3g3684 352 ProSitePatterns Cyclins signature. 120 151 IPR006671 -
Mtr3g3684 352 Gene3D - 101 216 - -
Mtr3g3684 352 SUPERFAMILY Cyclin-like 218 340 IPR036915 -
Mtr3g3684 352 PANTHER CYCLIN-A3-1-RELATED 16 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3684 Mtr-Chr3 50707894 50710149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3684 1 349 Core Cell Cycle Gene Families AT5G43080 54.416 6.35e-130 374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0477 1 5491126 5494580 Mtr3g3684 3 50707894 50710149 PCT