Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3638 ATGCAAGCGGTGGGGAGATTAGGGAGCTACATTAGTCAAGGCGTATACACCGTTTCCGGTCCCTTTCATCCATTCGGTGGCGCCGTCGACATCGTCGTTGTTCAACAACAAGACGGTTCATTCAAATCATCACCATGGTATGTTCGGTTCGGTAAATTCCAAGGTGTTTTAAAATCCAAAGAAAAAATCGTTCAAATCAATGTTAATGATGTTGAAGCTGATTTTCAAATGTATCTTGATAACAAAGGAGAAGCATTTTTTCTTAGAGAAGTTGATGCTGATGAAGCCGTTTTGATTGATCCGTTAGAATCTGTTGATGATATTGATCATCAATCTTTGAGGACTAAGAGTTGTAATTTTGATTCTGAGGATAGGAAGATTATAGGGAGGACTAGTTCTAAGCGTTCACGAATACTTGGTCTTATGTTTGGGAGAAGGTCTGTGAGTGGTGAATTTGAAGATGGTGTTGGGAATAAAGAACGTGCTGAGATTGCCGCAAATTTGTTGGATATTAAGTGGTCTACGAATCAAGATGGCGATCATGCTGTGGTAGTGGAGAATGAGGATGGTTCTATTGGTGTTGTAAAGGATGAAAAGGTATTGAGTGAAGAGGTTTCTGTGGTAGAGGGTGTTGAAGAGGGTTCTAAAGTGAAGATAGTTTGTTGCTCAAGTGAACAAACTCATGAGGTTATGTATCTTGCTCATGGGGAAAGTGGTGAGGTTCATGTCCATGATCAAGTCTTGCATTCACTCATATCTCAGGGTACCGAAACTGAGGGAGTCACTAAGAGTGCTGATGTAGTGGAGATCTTTGAGATTCATTCTCAGACTCAGAAAATAGATTCTTCTGATTCTGAGCCTAGTATGTACAATGTGGTAGATGTTGAGAACCTAACAACATCTCCTAAACCTCAAACTAACAGTTTGGATATAGGACACTGTTCAAGTGAGAAAGCTGAGTCATATAGTGTTACCAATGCTTCCAGTTACAACAGCGAGGATGACCAAGGATTATGTGAGAATAACACGAAAGATAAAGATGTCTCTAGCACGTTATCAACTACACAATACTCTCTTGGAGATTGTTTACCTGGTGAAACATCAAGGAGATTGCCGCCCTCAAGTTCAGATGAAGAGAATTTCCTTTTTAGTGACCTTGACGAAAACAGAATGAATGATCGATATGAGGGATCATTAACCCCTGAGTATATAGACAAAGACGATAGTATTTCTTACGAGGACGGCACTGAAACCTCAAGAGTGACATCCTGTCCCATAGTCATCCCTAGAAATGAGGATGCTGCGGGGGAAGTTGGGCAGAATACAGGATCCTTGCCAAATATTTCTTCTGGTAATAATAGTATGCGCCAACAAGTTCGTTTTCCTTTAAGTCAATCACTGGACTCGACATATCCTGGCAAAGATGACCTGAAATGCTTAAACTTAGACGAGTACAAAGAAAAGCAGTTACCGCATGAGCAGGAAGGTGGCAAAGCTTATCAAGATTCTGAAGAAGTCAAAGATACTACGCTGAATCTGCCCCCCGGTGGCACATCAACAAGCAGCTCTCCACCTGGTGGTAATTGGAGAATTTGGCCTTTCTCCTTGAGCAGAACAGGGTCTAGAGACTCTTCGCCACCTATTCCAAATGATGCCAAAAGTGATATTTTTGGTAATTCTCCAGAGAATAAGATTTGCACAGATGCGAACAAAAATGATACTAAACCCAATCTAACGAAAAAGAAGGTTAGGGAATTAACTCCAACTTCTGAACAGATAGCATCGTTGAATCTGAAGGAAGGGAGGAATATTGTAACCTTCACCTTTTCTACAGCTATGCTGGGGAAACAGCAGGTTGATGCTCAAATATATCTGTGGAAATGGAATGATCGTATAGTGATCTCAGATGTGGATGGAACAATTACAAAGTCAGATGTTCTTGGCCAGTTCATGCCTTTGGTTGGTGTTGACTGGTCACAGACTGGTGTTGCCCATTTATTCTCCGCAGTCAAGGAGAATGGTTACAAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAAGCCTATATTACACGACAATTCCTACTGAATCTTAAACAGGATGGCAAAGTTTTACCAGAGGGTCCAGTTGTTATTTCCCCCGATGGACTTTTTCCCTCTCTATACCGTGAAGTTATTAGAAGGGCTCCTCATGAATTCAAAATTGCATGCTTAGAGAGTATCAAGTGTCTTTTCCCTTCCGATTGCAATCCGTTCTATGCTGGTTTTGGAAATAGGGATACTGATGAAATCAGTTACCTTAAGGTTGGAATCCCGTTGGGAAAAATCTTCATTATAAATCCCAGGGGAGAGATCGTCGTGAACCGAAGTCTTGACACAAAATCATACACTTCTATGCATGCACTCGTGAACGGAATGTTCCCCTCAACAAGCACTTCTGAGCAGGAGGATTATAATTCATGGAATTTCTGGAAGCTACCCCCTTCTGCATTTGATTTTTGA 2502 0.4125 MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSKEKIVQINVNDVEADFQMYLDNKGEAFFLREVDADEAVLIDPLESVDDIDHQSLRTKSCNFDSEDRKIIGRTSSKRSRILGLMFGRRSVSGEFEDGVGNKERAEIAANLLDIKWSTNQDGDHAVVVENEDGSIGVVKDEKVLSEEVSVVEGVEEGSKVKIVCCSSEQTHEVMYLAHGESGEVHVHDQVLHSLISQGTETEGVTKSADVVEIFEIHSQTQKIDSSDSEPSMYNVVDVENLTTSPKPQTNSLDIGHCSSEKAESYSVTNASSYNSEDDQGLCENNTKDKDVSSTLSTTQYSLGDCLPGETSRRLPPSSSDEENFLFSDLDENRMNDRYEGSLTPEYIDKDDSISYEDGTETSRVTSCPIVIPRNEDAAGEVGQNTGSLPNISSGNNSMRQQVRFPLSQSLDSTYPGKDDLKCLNLDEYKEKQLPHEQEGGKAYQDSEEVKDTTLNLPPGGTSTSSSPPGGNWRIWPFSLSRTGSRDSSPPIPNDAKSDIFGNSPENKICTDANKNDTKPNLTKKKVRELTPTSEQIASLNLKEGRNIVTFTFSTAMLGKQQVDAQIYLWKWNDRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAVKENGYKLLFLSARSISQAYITRQFLLNLKQDGKVLPEGPVVISPDGLFPSLYREVIRRAPHEFKIACLESIKCLFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPRGEIVVNRSLDTKSYTSMHALVNGMFPSTSTSEQEDYNSWNFWKLPPSAFDF* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3638 833 PANTHER LIPIN 1 831 IPR026058 -
Mtr3g3638 833 Pfam LNS2 (Lipin/Ned1/Smp2) 585 808 IPR013209 -
Mtr3g3638 833 MobiDBLite consensus disorder prediction 489 576 - -
Mtr3g3638 833 SUPERFAMILY HAD-like 624 776 IPR036412 -
Mtr3g3638 833 MobiDBLite consensus disorder prediction 506 548 - -
Mtr3g3638 833 PANTHER GH19076P 1 831 - -
Mtr3g3638 833 SMART lns2 632 788 IPR031315 -
Mtr3g3638 833 MobiDBLite consensus disorder prediction 324 362 - -
Mtr3g3638 833 MobiDBLite consensus disorder prediction 324 378 - -
Mtr3g3638 833 MobiDBLite consensus disorder prediction 556 573 - -
Mtr3g3638 833 MobiDBLite consensus disorder prediction 489 505 - -
Mtr3g3638 833 Pfam lipin, N-terminal conserved region 1 97 IPR007651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3638 Mtr-Chr3 50210666 50217654 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3638 3 50210666 50217654 Mtr3g3638 3 50210666 50217654 ECH
Mtr1g0519 1 6043169 6050157 Mtr3g3638 3 50210666 50217654 PCT