Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3636 ATGTCTGGTCGGGGAGAACATCATTCCGTACCCCTTTCGGTGCTGTTGAAGCGTGAATCGCTGAGCGAGAAAATAGAGAAACCTGATATGGTTGTAGTGTATGGAAATGCTAGCGAGAATAAGAAAGGAGAAGATTTCATTTTACTAAAGACCGAATGTCAAAGAGTCGTTTGTGATGGTGTTTCTACGTATTCTGTCTTTGGGCTATTTGACGGACACAATGGATCTGCTGCTGCGATTTATGCCAAGGAGAATCTTCTGAACAATGTTTTAGGTGCCATTCCTCCTGATCTCAACAGAGATGAGTGGGTAGCAGCGTTGCCAAGGGCTTTGGTTGCTGGCTTTGTGAAGACTGATAAAGATTTTCAACAGAAAGCACAAACATCGGGAACAACTGTAACATTCGTGATTATAGAAGGTTGGGTTGTAACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAACCTTCTGAAGGTGGGCTTCATTACTTGTCAGCAGATCATCGACTAGACACAAATGAAGAAGAGAGGGTGCGCATCACTTCTAGTGGGGGTGAAGTTGGTCGGCTAAATACAGGCGGAGGTGCAGAGGTTGGTCCGTTGAGATGTTGGCCTGGTGGGTTGTGTCTCTCTCGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTACCATATGTAAAGCAAGTGAAGCTTTCCAATGCTGGAGGAAGACTTGTTATCAGCAGTGATGGAGTCTGGGATGCTCTAACTGCAGAAATGGTCCTTGATAGTTGTCGTGGAATGTCGGCGGAGGCTGCAGCACCACATATTGTAAAAGAATCTTTGCAAGCAAAGGGCCTCAGAGATGACACAACCTGCGTCGTGGTCGATATATTACCCCAGGAGAAACCACCTACTTCTGTACGAACACAAAAGAAACCGGTAAAAGGAATGTTGAAGGCCATTTTCCGCAAAAAGTCCTCCGAGTCATCTTCATATGTTGAAAAAGAATACGTTGAGCCAGATATGGTACGGGAACTATACGAGGAAGGATCTGCCTTGCTTTCAGAAAGGTTTGAAACAAAATATCCACTCTGCAACATGTTCAAGTTGTTCATGTGTGCAGTGTGTCAAGTAGAGATTAAACCTGGGGAGGGTATTTCAGTACATGAGGGTGCGCCTAACGCAAGGAAACCGCGTCCCTGGGATGGACCTTTCCTTTGCTTAAGTTGCCAAAAGAAGAAAGAAGCCATGGAAGGGAAACAGATATCAGATAGACATAGCAATGGAAGTGACTAA 1290 0.4488 MSGRGEHHSVPLSVLLKRESLSEKIEKPDMVVVYGNASENKKGEDFILLKTECQRVVCDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLGAIPPDLNRDEWVAALPRALVAGFVKTDKDFQQKAQTSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGLHYLSADHRLDTNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSNAGGRLVISSDGVWDALTAEMVLDSCRGMSAEAAAPHIVKESLQAKGLRDDTTCVVVDILPQEKPPTSVRTQKKPVKGMLKAIFRKKSSESSSYVEKEYVEPDMVRELYEEGSALLSERFETKYPLCNMFKLFMCAVCQVEIKPGEGISVHEGAPNARKPRPWDGPFLCLSCQKKKEAMEGKQISDRHSNGSD* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3636 429 ProSiteProfiles PPM-type phosphatase domain profile. 24 295 IPR001932 -
Mtr3g3636 429 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 3 425 - -
Mtr3g3636 429 SMART PP2C_4 19 293 IPR001932 -
Mtr3g3636 429 SUPERFAMILY PP2C-like 39 295 IPR036457 -
Mtr3g3636 429 Pfam Protein phosphatase 2C 58 282 IPR001932 -
Mtr3g3636 429 CDD PP2Cc 40 295 IPR001932 -
Mtr3g3636 429 Gene3D - 25 302 IPR036457 -
Mtr3g3636 429 PANTHER ALPHABET, ISOFORM E-RELATED 3 425 - -
Mtr3g3636 429 SMART PP2C_SIG_2 49 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3636 Mtr-Chr3 50186567 50191541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3636 1 429 PP2C-type Phosphatase Gene Family AT1G47380 76.279 0.0 696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3636 3 50186567 50191541 Mtr3g3636 3 50186567 50191541 ECH
Mtr1g0521 1 6062328 6068367 Mtr3g3636 3 50186567 50191541 PCT