Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3623 ATGTCACATGGAAAAGTAATTAAACTTTCTATAAAGTCAGAACTCATAAAAGGGTCTCATCACAATTCACAAGCCATGACTTCAGTTTCAATAAACAAAGATCCCAGAATTCCTCAAAACTCTCAAAAGAGCATAAGAAATGCAGTTAAAGGTGGAAAAACATCAAGCAAAGACAGAAAATTGGCTTTGCAACAAGATGTTGACAGGTTGAAGAAGAAGCTTAGGCATGAAGAGAACATTCACAAGGCATTGGAAAGAGCTTTGAATAGGCCTTTGGGAGCCTTACCTCGTCTTCCTCCTTATCTCCCTCCCTATACACTTGGACTTGTGGCTGAAGTGGCTGTGCTAGAAGAAGAAATAGTTAGGCTTGAAGAGAAGGTCTTACATTTCAGGCAGGATTTGCATCAAGAAGCAGTTTACATGTCATCCTCCAAGATGAAACTGGAGCATTTGGAAGCAGCTTCTGTGAATAATGCAAATCCAAATGATAGTACAAAATTGGATCATACTGCAACATTTTCAACTAGGCCTAAAACTACTCTTCCTGATGATAAACAAAGAAAAGAGATTCAATCACGTGCTCATTCTTTCAAGAGCAACAAGAAATCCATATGTAAAGACCAAATGGCAAAAATTTCAATTAAGAAAATTCCAGTTGACAATAAACCACTACAGAAACATTGTGAACCTCCTAAAAAACAGAAAGAACTAAGGCTGAACAACAAACCAATTGCCGAAGTCAGAAATCATCGTCTACAAGAAACTCCACAAGGAGATGAAAGTCCAAATATAATCTCTGAGAATATTCTGAAGTGCTTAACTAGCATTCTCTTGAGAATGAGTACACCAACTTTAAAGCCTCTAAAATCTAAAAACTGCATTGAAGGAACAGAGTTTTTTGATCCTTATGGCATCTTGGAAGTTGGAAAGAAAGATATTGGTCCGTACAAGAAATTATGTGAAAGTATTGAAGCTGAATCTTTCAATCCAGCACAAACTGCTAAGTCCTTGTTTCTACTACATCGGTTGAAGATTCTTTTGAGACAACTAACATGTGTTAACATTGACAACCTCAACCGCCAAGAGAAGCTTGCATTTTGGATCAACATATATAACTCTTGTATGATGAATGCTTTCGTAGAAAAAGGCATACCAGAAAGTCCTGAAATGGTTGTTGCATTGATGCAGAAGGCAACAATAAATGTAGGTGGAACCTTGTTAAATGCCACAACCATAGAACACTGCATTTTAAGGCTTCCATATCACTGGAAATATTTCTTACAGCTAAATTCCAAACAGATCACATTATTAAAGGAAGTGAAAAGTCATGAAATGACAATAAGAAGCACTTATGGACTGGAATTGTCAGAACCCCTAGTCACATTTGCTCTCTCTTGTGGAACTTGGTCATCTCCTGCTGTTAGAGTTTACACAGCATCACATGTTGAGAAGGAACTAGAAATAGCCAAAAGAGAATACTTACAGGCTGCAATTGGAATTTCAACATCAAAGTTTGTTATTCCAAAGATGTTGGATTGGTATTTACTTGACTTTGCAAAAGACTTAGAATCATTGCTAGACTGGATATGCCTCCAATTACCAAGTGAACAAGGGAAAGAAGCAATTAAGTTATTTGAGAAAAGAAAAACTGAACCTCACTCACAATTTGTAAAAATTATGCCTTATAAGTTTAGTTTTAGATACTTGCTGAGCACATAA 1719 0.3653 MSHGKVIKLSIKSELIKGSHHNSQAMTSVSINKDPRIPQNSQKSIRNAVKGGKTSSKDRKLALQQDVDRLKKKLRHEENIHKALERALNRPLGALPRLPPYLPPYTLGLVAEVAVLEEEIVRLEEKVLHFRQDLHQEAVYMSSSKMKLEHLEAASVNNANPNDSTKLDHTATFSTRPKTTLPDDKQRKEIQSRAHSFKSNKKSICKDQMAKISIKKIPVDNKPLQKHCEPPKKQKELRLNNKPIAEVRNHRLQETPQGDESPNIISENILKCLTSILLRMSTPTLKPLKSKNCIEGTEFFDPYGILEVGKKDIGPYKKLCESIEAESFNPAQTAKSLFLLHRLKILLRQLTCVNIDNLNRQEKLAFWINIYNSCMMNAFVEKGIPESPEMVVALMQKATINVGGTLLNATTIEHCILRLPYHWKYFLQLNSKQITLLKEVKSHEMTIRSTYGLELSEPLVTFALSCGTWSSPAVRVYTASHVEKELEIAKREYLQAAIGISTSKFVIPKMLDWYLLDFAKDLESLLDWICLQLPSEQGKEAIKLFEKRKTEPHSQFVKIMPYKFSFRYLLST* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3623 572 MobiDBLite consensus disorder prediction 18 60 - -
Mtr3g3623 572 Pfam Protein of unknown function, DUF547 356 494 IPR006869 -
Mtr3g3623 572 PANTHER EXPRESSED PROTEIN 7 571 - -
Mtr3g3623 572 Coils Coil 60 87 - -
Mtr3g3623 572 MobiDBLite consensus disorder prediction 18 51 - -
Mtr3g3623 572 MobiDBLite consensus disorder prediction 156 198 - -
Mtr3g3623 572 Pfam Leucine-zipper of ternary complex factor MIP1 56 137 IPR025757 -
Mtr3g3623 572 Coils Coil 106 133 - -
Mtr3g3623 572 PANTHER TRANSCRIPTION FACTOR 7 571 - -
Mtr3g3623 572 MobiDBLite consensus disorder prediction 180 198 - -
Mtr3g3623 572 MobiDBLite consensus disorder prediction 156 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3623 Mtr-Chr3 50091248 50095180 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3623 3 50091248 50095180 Mtr3g3623 3 50091248 50095180 ECH
Mtr1g0539 1 6285625 6288926 Mtr3g3623 3 50091248 50095180 PCT