Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1857 ATGAGTCAATACATGGATAAGGACAGTGTGGTTTTGTTGGATTTTTGGCCAAGCGTATATGGAATGAGAGTGAAAATTGCTTTGGAAGAGAAGGGAGTCTCATATGAATGTAGACAAGAAGATTTTCAAGATAAAAGCTCTATGCTTTTAGAGATGAACCCGGTTTACAAAATGATACCGGTTTTGGTTCATAATGGAAAACCTATATGTGAATCACTTAATATAGTTGAATACATTGATGAAGCTTGGAATCACAAACCTTCTCTTTTGCCCTTAGACCCTTACAAGCGATCACAAGCTAAGTTTTGGGGAGATTACATTGACAAACATGTATACAGCATTCGAAGGAAGCTATGGAAAGGAAAGGTTGAAGAACAAGAGGAAGGTAAAAAGAAGTTTATAGAAGGCTTGAAGACTCTAGAAGATGAGCTTGGAGACAAGCCATATTTTGGTGGAGATGAGTTTGGGTATGTTGATGTGGCTCTTATACCCTTCACTAGTTGGTTTTACACTTACGAGATATATGGGAAACTAAGCATTGAGAAAGAGTGTCCTAAGCTTGTAGCTTGGGCCAAAAGGTGTATGGAAAAAGAGAGTGTGGCAAAGTCACTTCCTCACCCTCACAAAATCTATGGTTTTGCAATGCAATATAAACAGAAACATAGACTTGAATAG 675 0.3793 MSQYMDKDSVVLLDFWPSVYGMRVKIALEEKGVSYECRQEDFQDKSSMLLEMNPVYKMIPVLVHNGKPICESLNIVEYIDEAWNHKPSLLPLDPYKRSQAKFWGDYIDKHVYSIRRKLWKGKVEEQEEGKKKFIEGLKTLEDELGDKPYFGGDEFGYVDVALIPFTSWFYTYEIYGKLSIEKECPKLVAWAKRCMEKESVAKSLPHPHKIYGFAMQYKQKHRLE* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1857 224 CDD GST_C_Tau 94 217 IPR045074 GO:0004364|GO:0006749
Mtr3g1857 224 SUPERFAMILY Thioredoxin-like 10 112 IPR036249 -
Mtr3g1857 224 Gene3D - 93 224 - -
Mtr3g1857 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 213 IPR010987 -
Mtr3g1857 224 Coils Coil 123 143 - -
Mtr3g1857 224 SFLD Main.3: Omega- and Tau-like 6 221 IPR045073 -
Mtr3g1857 224 CDD GST_N_Tau 10 83 - -
Mtr3g1857 224 Gene3D Glutaredoxin 6 92 - -
Mtr3g1857 224 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 8 220 - -
Mtr3g1857 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Mtr3g1857 224 SUPERFAMILY GST C-terminal domain-like 81 220 IPR036282 -
Mtr3g1857 224 Pfam Glutathione S-transferase, N-terminal domain 10 81 IPR004045 -
Mtr3g1857 224 SFLD Glutathione Transferase (cytosolic) 6 221 IPR040079 -
Mtr3g1857 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 220 IPR045073 -
Mtr3g1857 224 Pfam Glutathione S-transferase, C-terminal domain 127 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1857 Mtr-Chr3 31272558 31274915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1857 11 221 Glutathione S-transferase Gene Family AT1G78370 61.137 6.35e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1857 K00799 - gmx:100527221 366.311