Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1140 ATGTCTTCCAACGGTTCTTTGAAAATGGAATTGTCGAAGAAGACTTCATTTTTGGGTTTGAGATTATGGGTTTTGATAGGAATTGGTGTTTTTGCATTTATAGTTCTGATTCTTTGTTTGTTATCTATATGGATAACGTTTTGGAGAAAAACAAGGAGGTCTGTAGACAAGTACTCGTTATCTCAAATACCACACGTCTCGAAGGATATCAAAGTTGACAGGGTTGAAGTGCAACCTTCTAACGATCAAGTAGATAGTGTGTCTATTCATGTCCACGACAACATGACAAGCGATAAGAATTCGGATAAGTTGTTTGTTCATTTGAGTAAATCCAGTGATCCTGATAATATCAGTCAGTGTAGTTCGATTTATCACCACGAGAGAGGATTAAGTTTAATATCAGCAGAGGATGGAAACTTTGGAACTGTTAAGAAGCAGTATATGGTAACTGCATCTCCTCTGGTTGGCTTGTCTGAAGGTTCTCATCTTGGATGGGGTCATTGGTTCACACTTAGAGATCTCGAATTTTCGACTAACCGCTTCTCGGCTGAGAATGTTATTGGTGAAGGCGGATATGGAGTTGTTTATAAGGGAAGATTGATCAATGGATCTGAGGTGGCAGTGAAGCGACTTCTTAACAACTTGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTCGAGGCTATAGGTCATGTCAGACATAAAAATCTTGTGCGCTTACTTGGATTTTGCGTAGAAGGAGTTCACAGGTTGCTTGTGTATGAGTATGTGAACAATGGTAACTTAGAACAATGGTTACATGGGGCAATGAGGCAACATGGAGTACTTACGTGGGAAGCTCGAATGAAAGTTATTCTCGGCACAGCGAAAGCGCTTGCTTATTTTCATGAAGCAATAGAACCAAAAGTTGTTCACCGTGATATAAAGTCGAGCAACATTTTAATTGATAGTGCGTTCAATGCAAAGGTTTCTGATTTTGGTTTAGCCAAACTTTTGGATTCCGGAGAAAGTCACATAACCACCAGAGTAATGGGAACATTTGGTTACGTTGCACCAGAATATGCTAATACTGGCCTGTTAAACGAGAAGAGTGATATTTACAGCTTTGGTGTTCTCCTACTAGAAGCGATTACCGGAAGGGACCCTGTAGACTATACACGTCCTGCCAACGAGGTGAATCTTGTTGAGTGGCTGAAGATGATGGTGGGGTCAAGGAGAACTGAGGAAGTTGTGGACTCTAGCCTTGAAGTGAAACCACCAACTCGTGCTTTAAAACGTGCCCTTCTTGTTGCATTTAGGTGTGTTGATCCTGATTCAGAGAAGAGACCTAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATCCATTCAGAGAGGATCGAAGGTATAGAAAAAGCCGCACCGCCAGCATAGACATTGTGGAATCTCTGAAGGATATCTCTAGTCCTTCTGATACTGCTGATAAGACGAAAGGTTCTGAAGAATGCGCACATGAGACAACTCAAGTGTAG 1518 0.4137 MSSNGSLKMELSKKTSFLGLRLWVLIGIGVFAFIVLILCLLSIWITFWRKTRRSVDKYSLSQIPHVSKDIKVDRVEVQPSNDQVDSVSIHVHDNMTSDKNSDKLFVHLSKSSDPDNISQCSSIYHHERGLSLISAEDGNFGTVKKQYMVTASPLVGLSEGSHLGWGHWFTLRDLEFSTNRFSAENVIGEGGYGVVYKGRLINGSEVAVKRLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCVEGVHRLLVYEYVNNGNLEQWLHGAMRQHGVLTWEARMKVILGTAKALAYFHEAIEPKVVHRDIKSSNILIDSAFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYTRPANEVNLVEWLKMMVGSRRTEEVVDSSLEVKPPTRALKRALLVAFRCVDPDSEKRPKMSQVVRMLEADEYPFREDRRYRKSRTASIDIVESLKDISSPSDTADKTKGSEECAHETTQV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1140 505 Gene3D Phosphorylase Kinase; domain 1 160 256 - -
Mtr3g1140 505 Coils Coil 201 221 - -
Mtr3g1140 505 ProSiteProfiles Protein kinase domain profile. 181 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1140 505 SMART serkin_6 181 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1140 505 SUPERFAMILY Protein kinase-like (PK-like) 164 459 IPR011009 -
Mtr3g1140 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Mtr3g1140 505 MobiDBLite consensus disorder prediction 484 498 - -
Mtr3g1140 505 Gene3D Transferase(Phosphotransferase) domain 1 257 470 - -
Mtr3g1140 505 PANTHER OS01G0323000 PROTEIN 2 499 - -
Mtr3g1140 505 Pfam Protein kinase domain 183 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g1140 505 MobiDBLite consensus disorder prediction 479 505 - -
Mtr3g1140 505 CDD STKc_IRAK 187 453 - -
Mtr3g1140 505 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524
Mtr3g1140 505 PANTHER RECEPTOR-LIKE KINASE PLANT 2 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1140 Mtr-Chr3 20421386 20425940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1140 19 455 Trihelix Transcription Factor Family AT1G70460 39.909 4.74e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mtr3g1140 Pkinase 9.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1140 - - gmx:100813931 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1140 3 20421386 20425940 Mtr3g1140 3 20421386 20425940 ECH
Mtr3g1140 3 20421386 20425940 Mtr5g3216 5 41009902 41014131 PCT
Mtr5g2346 5 30826721 30830381 Mtr3g1140 3 20421386 20425940 PCT