Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0409 ATGGCGTCATCATCATTGGTGGAATCTCTTGTTCTTCAACTCCATGAGATATCAGCTGTGAAATTCGGCAACTTCAAGCTCAAATCTGGCATCTCCTCACCAATCTACATTGACCTCCGTCTCATAATTTCTTATCCTTCTCTCCTCCAGCAAATCTCTCAGACCTTAATTTCATCAGTCTCTTCCACCTCATTTGATCTGGTATGTGGTGTCCCTTACACTGCCCTACCCATTGCCACTTGCGTCTCTCTTGCTCAGAACATCCCCATGGTCATGCGTCGTAAGGAAGTCAAAGACTACGGCACTGCTAAAGCCATTGAAGGTGATTTCAAGTCTGGTCAAAGTTGCTTAATCATCGAGGATTTGGTTACCAGTGGAACATCAGTTTTGGAAACAGCTGCACCACTACGTTCTGTGGGGTTGAAGATCAGTGATGCGGTTGTCCTGATTGATAGAGAGCAAGGTGGGCGGGAAAATTTGGAGGAGAATGGCATCAAGCTGCATGCAATCATTAAATTGACTGAAATGGTGAAAATTTTGAGGGATCATGGAAGACTTGATGACGAGATGGTAGGAGTTGTTACAAAATTCTTAGATGAGAATAGAAAGGTTGCAGCTCTGGCAAAGGTTGAGAAGCCAATAACCAAGGTCAAGTCTTTGTCATTTGGGGAGAGGGCGAATCTGTCCAAGAATCCAACAGGAAAGAAGTTGTTTGAGATAATGGCTCAGAAGGAGAGTAATCTGTGTTTGGCTGCAGATGTTGGAACTGCAGCTGAATTGCTTGAAATTGCCGAGAAGGTTGGACCTGAGATATGCTTGCTGAAGACTCATGTGGATATTTTGCCTGATTTTACTCCTGATTTTGGCTCTAAGCTTCTCTCGATTGCAGAGAAACATAACTTCTTAATCTTTGAGGATCGTAAATTTGCTGACATTGGTAACACAGTAACCATGCAATATGCAGGAGGGATCTTTCACATATTGGATTGGGCTCACATAGTAAATGCTCACATAATCTCTGGTCCTGGAATCGTGGATGGACTAAAATTGAAGGGTTTGCCTCGTGGCAGGGGACTATTGCTGCTTGCTGAAATGAGTTCAGCCGGTAACCTTGCCAAGGGAGATTATACTGCTGCTGCATTGAAAATTGCTGAGGAACATTCCGACTTTGTAATTGGCTTCATATCAGTCAATCCAGCATCATGGCCAGGGGCACCCATAAATCCTTCTTTCATTCAGGCAACTCCTGGAGTTCAAATGGTTACTGGTGGTGATGGCTTAGGGCAGCAATATAACACTCCATATTCTGTCGTTCATGATAGGGGAAGTGACATTATCATCGTTGGACGTGGTATCATCAAGGCAGCAAATCCTGCTGAGGCAGCTCACGAATACCGGGTACAAGGATGGAATGCATATTTGGCCAAATCTGCTTGA 1437 0.4419 MASSSLVESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLIISYPSLLQQISQTLISSVSSTSFDLVCGVPYTALPIATCVSLAQNIPMVMRRKEVKDYGTAKAIEGDFKSGQSCLIIEDLVTSGTSVLETAAPLRSVGLKISDAVVLIDREQGGRENLEENGIKLHAIIKLTEMVKILRDHGRLDDEMVGVVTKFLDENRKVAALAKVEKPITKVKSLSFGERANLSKNPTGKKLFEIMAQKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLLSIAEKHNFLIFEDRKFADIGNTVTMQYAGGIFHILDWAHIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSAGNLAKGDYTAAALKIAEEHSDFVIGFISVNPASWPGAPINPSFIQATPGVQMVTGGDGLGQQYNTPYSVVHDRGSDIIIVGRGIIKAANPAEAAHEYRVQGWNAYLAKSA* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0409 478 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 7 477 - -
Mtr3g0409 478 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 303 316 IPR018089 GO:0004590|GO:0006207
Mtr3g0409 478 CDD PRTases_typeI 65 172 IPR000836 -
Mtr3g0409 478 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 246 465 IPR001754 GO:0004590|GO:0006207
Mtr3g0409 478 CDD OMP_decarboxylase_like 248 465 - -
Mtr3g0409 478 Gene3D Aldolase class I 216 477 IPR013785 -
Mtr3g0409 478 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 231 IPR023031 GO:0004588|GO:0006221
Mtr3g0409 478 Gene3D - 2 211 IPR029057 -
Mtr3g0409 478 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 248 466 IPR014732 GO:0004590|GO:0044205
Mtr3g0409 478 SMART OMPdecase_2 247 465 IPR001754 GO:0004590|GO:0006207
Mtr3g0409 478 SUPERFAMILY PRTase-like 4 192 IPR029057 -
Mtr3g0409 478 Pfam Phosphoribosyl transferase domain 56 158 IPR000836 -
Mtr3g0409 478 TIGRFAM pyrE: orotate phosphoribosyltransferase 14 175 IPR004467 GO:0004588
Mtr3g0409 478 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 7 477 - -
Mtr3g0409 478 SUPERFAMILY Ribulose-phoshate binding barrel 220 474 IPR011060 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0409 Mtr-Chr3 5183213 5188037 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0409 3 5183213 5188037 Mtr8g1195 8 14605066 14610774 PCT