Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0303 ATGGGCGTTGAAAAGCTTAGATCTTGTACAATCTACCTTGAGAACTCTAAGCCCTACATTGCTATGATCCTTTTACAATTTGGCTATGCAGGCATGATTATTATAAGCAAGCTTTCTCTCAATGGAGGCATGAGTCATTATGTCCTTGTTGTTTATCGCCACGCTTTTGCAACCGTTGCTATAGCTCCATTCGCCATAATCTTTGAAAGGAAGTCTCAACCAAAGATTACATTTCCCATTTTCATTCAAATTTTCCTCCTAGCTTTGCTTGGGCCGGTGATAGATCAAAACTTATACTATGCTGGGTTGAAATTAACATCTCCAACCTTCTCATGTGCAATGACCAATATTCTTCCAGCAATGACTTTTGCAATGGCTGTTTTATGCCGGATGGAAACGGTTAACATGAAGAAGTTAAGATGCCAAGCAAAGGTGATTGGAACCATTTTAACTGTGGCTGGGGCAATGTTGATGACCTTATACAAAGGTCCTATTGTGGAGTTATTTTGGACTGGACATATATTTCATAGTAAAAGCAATGCAACAAACATCACAAGATCCTCAAGCAAGAATAATTGGTTTTTAGGTTCCATTTTACTAATCATTTCTACCATTGCATGGGCATCACTCTTTGTTTTACAAGCTAAAGCAATAGAAACATACAAGAATCATCAGCTAACACTCACATCACTTATATGTTTCTTTGGCACGATTCTATCTTTTGTGACCACTTTGATTATGGAACACAATGCTTCTGTGTGGACAATTGGTTGGGATATGAATTTATTTGCTGCTGCCTATGCCGGGATTGTTGCATCAAGTATATCATACTACATACAAGGATTGGTTATAAAAAATAAAGGGCCTGTTTTTGCATCATCATTTAGCCCTTTGATGATGATCATTGTAGCCATCATGGGGTCCTTTATCCTTGCAGAGCAGATTTTTCTTGGAAGTGTTATTGGTTCCATCTTAGTTGTCCTAGGCTTATATTCTGTTTTGTGGGGAAAGCACAAAGAACTTCTGGAAAATAAAGTGGCGCCAGATGATATACCCTTGCCTATGAAGGGTGCTCAAGTAAATGGAAATATAGGGACATTTTGTGAATCAATTGATCAACTTTGTGAAGCAAAATCAGATCAGAAAGTAGAATCAAACATTTCTATCGTTATTATTAATTACAACATAACTTTGTGA 1197 0.3734 MGVEKLRSCTIYLENSKPYIAMILLQFGYAGMIIISKLSLNGGMSHYVLVVYRHAFATVAIAPFAIIFERKSQPKITFPIFIQIFLLALLGPVIDQNLYYAGLKLTSPTFSCAMTNILPAMTFAMAVLCRMETVNMKKLRCQAKVIGTILTVAGAMLMTLYKGPIVELFWTGHIFHSKSNATNITRSSSKNNWFLGSILLIISTIAWASLFVLQAKAIETYKNHQLTLTSLICFFGTILSFVTTLIMEHNASVWTIGWDMNLFAAAYAGIVASSISYYIQGLVIKNKGPVFASSFSPLMMIIVAIMGSFILAEQIFLGSVIGSILVVLGLYSVLWGKHKELLENKVAPDDIPLPMKGAQVNGNIGTFCESIDQLCEAKSDQKVESNISIVIINYNITL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0303 398 Pfam EamA-like transporter family 195 334 IPR000620 GO:0016020|GO:0016021
Mtr3g0303 398 Pfam EamA-like transporter family 17 159 IPR000620 GO:0016020|GO:0016021
Mtr3g0303 398 PANTHER WAT1-RELATED PROTEIN 12 373 IPR030184 GO:0016021|GO:0022857
Mtr3g0303 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 339 - -
Mtr3g0303 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Mtr3g0303 398 PANTHER WAT1-RELATED PROTEIN 12 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0303 Mtr-Chr3 3407631 3416430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0303 1 340 Nodulin-like Gene Family AT5G07050 69.096 2.69e-172 485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0303 3 3407631 3416430 Mtr8g1288 8 15798722 15801904 PCT