Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0267 ATGCTGGGTGATTTTGGTTTGGCCAAAATTGCAAGTGAAGAATTATCATGCTCAATAGAATGTCCTGGAAATCTGGCATATTGGGCCCCAGAATATGCAGCATATGGTAAAGTATCAAATAAAACAGATGTATATTCTTTTGGAGTGGTTCTTGTTGAGCTAATAACCGGAATGAGGACTACTGACAAAAGACTTGGAGGAAAGGGTCTAGTAGGATGGGCTAGACCACTACTAAAAGAAGGGAACTGTCAAAAACTTGTTGATGGAAGGATAATGGATTCACATGGACATGATTGTCATCAAATCTTTTGGATGAGCCGTCTAGCTGGAAATTGTTTAAACAAAGATCCTCAGAAACGACTTGATATGAATACAGTGGTCAAAGCCTTAATACATATAGAAGAAGGTTGCAGTAGCTGCATTGTGGAAAAAGACAGTAGTACCCTTCCCATGTCCGACTATTCTAAATCAAAAGATGATATGCGGGAGCGGGACTCTTCAGAATCAAATGGTGCTAGTTCCAAGTCGAGGACAGCATATTGCTACTATAAGTCTAGTGAAAACTAA 567 0.3951 MLGDFGLAKIASEELSCSIECPGNLAYWAPEYAAYGKVSNKTDVYSFGVVLVELITGMRTTDKRLGGKGLVGWARPLLKEGNCQKLVDGRIMDSHGHDCHQIFWMSRLAGNCLNKDPQKRLDMNTVVKALIHIEEGCSSCIVEKDSSTLPMSDYSKSKDDMRERDSSESNGASSKSRTAYCYYKSSEN* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0267 188 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 163 - -
Mtr3g0267 188 Gene3D Transferase(Phosphotransferase) domain 1 1 156 - -
Mtr3g0267 188 ProSiteProfiles Protein kinase domain profile. 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g0267 188 SUPERFAMILY Protein kinase-like (PK-like) 2 131 IPR011009 -
Mtr3g0267 188 Pfam Protein tyrosine and serine/threonine kinase 2 130 IPR001245 GO:0004672|GO:0006468
Mtr3g0267 188 MobiDBLite consensus disorder prediction 171 188 - -
Mtr3g0267 188 PANTHER OS01G0253100 PROTEIN 1 163 IPR045271 GO:0004714|GO:0006468
Mtr3g0267 188 MobiDBLite consensus disorder prediction 148 188 - -
Mtr3g0267 188 MobiDBLite consensus disorder prediction 155 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0267 Mtr-Chr3 2938141 2940871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0267 1 130 Trihelix Transcription Factor Family AT1G70460 42.336 5.36e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr3g0267 PK_Tyr_Ser-Thr 1.7e-12 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0267 3 2938141 2940871 Mtr8g1318 8 16238149 16242852 PCT