Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0237 ATGGAAGATTTTGGAGAGTCATTGTTGAAGAAACAATATTATCATGAGAATTGTCCTGGTTGTAAGGTGGATCAAGCCAAGGCATTGAAAAAGGATGTTACATTTAGAAATGCTTTCAATATATGGATTGTTGTCTTATGTAGTTCTCTTCCTATAGCATCTTTATTTCCATACCTCTATTTCATGGTAAAGGATTTTAATATTGCTAAAACAGAAGAAGATATCAGTTCCTATGCTGGTTATGTAGGATCTGCCTACATGCTTGGTAGAGCTTCGACATCTATATTATGGGGAATGATAGCCGATCGCTATGGTCGAAAACCTGTTGTGATAATAGGAATTATTTCTGTTATAATTTTCAACACACTATTTGGCCTTTGCACAAGTTTTTGGATGGCTGTTACGATGAGATTCGTTCTTGGAGGTTTAAATGGTTTGCTTGGACCAATGAAGGCTTATTCTTCTGAAATTTTTAGAGAAGAATACCAAGCTTTAGGACAATCAACTGTTGCAGCTGCTTGGGGAGTAGGATTGGTCTTCGGACCAGCGTTGGGAGGTTATTTGGCTCAGCCAGTACAGAAATATCCAAATATATTTCCAAAGGATTCCTTTTGGGACAAGTTTCCATACTTCTTACCATGTTTCATTGTATCAGCTATGGCATTTGTTGTAGCGATTTCCTGCATTTGGCTACCGGAGACACTTCATAATCACAAAGTATCGACCAACAAAATTGAAGCTTTAGAAAATGGAACTAACGAGGATGAGAAAAATAAGACGATCCAAAAAGATGAAAGCCTCCTAAAAAATTGGCCCTTAATGTCATCTATTATTGTTTATTGTGTTTTCGCGATTCATGACGTTGCTTTTGCAGAGATTTTCTCATTATGGGCTGAAAGTCCTCGAAGGTTAGGCGGTTTGAACTTTGGAACTAATGATGTCGGTAATATTCTTGCAGTATCAGGTGTTGGTATTATAATGTTCCAGCTTGGCTTATATCAATCAGTGCAAAAAATTTGTGGACCTATCGTTCTTGCTCGCATTGCAGGGGTGTTATCAATACCAATCTTGCAAAGCTTCCCTTTTATGACAATGTTGTCAGGCTTTACACTGTACATATCGATATATAGTGCTTCCATTTTAAAGAATCTTTTGATTGAGATAATTTCTACTGGTTTATTCATTCTGCAAAATAAAGCAGTGGATCAACATCAAAGAGGTGTAGCAAATGGCCTTTGCATAACTGCTATGTCAGCATGCAAGGTAATTGGTCCAGCTGGAGGCGGCGCAATCTTAACTTGGTCACAAAAGAGGATGGATGCTTCTTTCCTCCCAGGCCCCCATCTGGTGTTCTTTGTGCTCAATGTTATTGAAGGACTTGCATTGTTATTGACATTCAAACCATTCCTGATTGAAAGAAAACCCCCCTCGGAGCAGTTGCGCTGA 1446 0.3852 MEDFGESLLKKQYYHENCPGCKVDQAKALKKDVTFRNAFNIWIVVLCSSLPIASLFPYLYFMVKDFNIAKTEEDISSYAGYVGSAYMLGRASTSILWGMIADRYGRKPVVIIGIISVIIFNTLFGLCTSFWMAVTMRFVLGGLNGLLGPMKAYSSEIFREEYQALGQSTVAAAWGVGLVFGPALGGYLAQPVQKYPNIFPKDSFWDKFPYFLPCFIVSAMAFVVAISCIWLPETLHNHKVSTNKIEALENGTNEDEKNKTIQKDESLLKNWPLMSSIIVYCVFAIHDVAFAEIFSLWAESPRRLGGLNFGTNDVGNILAVSGVGIIMFQLGLYQSVQKICGPIVLARIAGVLSIPILQSFPFMTMLSGFTLYISIYSASILKNLLIEIISTGLFILQNKAVDQHQRGVANGLCITAMSACKVIGPAGGGAILTWSQKRMDASFLPGPHLVFFVLNVIEGLALLLTFKPFLIERKPPSEQLR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0237 481 PRINTS Tetracycline resistance protein signature 110 134 IPR001958 GO:0022857
Mtr3g0237 481 PRINTS Tetracycline resistance protein signature 167 189 IPR001958 GO:0022857
Mtr3g0237 481 PRINTS Tetracycline resistance protein signature 338 358 IPR001958 GO:0022857
Mtr3g0237 481 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 480 - -
Mtr3g0237 481 Pfam Major Facilitator Superfamily 41 425 IPR011701 GO:0022857|GO:0055085
Mtr3g0237 481 Gene3D MFS general substrate transporter like domains 34 466 IPR036259 -
Mtr3g0237 481 SUPERFAMILY MFS general substrate transporter 36 474 IPR036259 -
Mtr3g0237 481 CDD MFS_SLC46_TetA_like 41 467 - -
Mtr3g0237 481 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 480 - -
Mtr3g0237 481 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 473 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0237 Mtr-Chr3 2634893 2640420 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0237 3 2634893 2640420 Mtr8g1332 8 16420158 16424091 PCT