Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0233 ATGTCTTTCTTCAAATCCTATGGAAAAGTTGATGAACATGATCAAATGATGTTAGAAGCAAAAAGAAAAACCCGAAAGAGAATCACAATCATAAGCTTATCTTCAATAATCTTCATTGGTGTTGTAATTGCAGCTGTATTAGGAGTTGTTAACTCAAAAAATGATGATGATAACAACAATAATGCATCTCAAAATTCAGTGACTAATTCTATGAAAGCTGTTTGTGATGTTACATTGTACAAAGATTCATGTTATAACAGTCTTAGTTCTATTGTTGGCTCAGGAAAAGAGGTTCAACCTGAGGAGTTGTTTAAGTTATCAATCAATGTAGCATTAACTCATGTGTCTAAAGCTGTTGAGTATTTCAATGAACATGGTGTTTTCAAAAAGTTGATAGAAAATAGTAGAACCAATGAAGCTTTGAAAAATTGTAGGGTTCTTTTGGATCTTGCTATTGATCATTTGAATAACACATTGACTGCTTCAAGGGAAAATTCTTCACTTCATCAAGTTTTTGATGATCTTCAAACATGGTTAAGTGCTGCAGGTACGTACCAACAAACTTGCATTGAAGGCTTTGAGGATACAAAAGAACAACTCAAGACAAGTGTAACAAGCTACCTCAAAAACTCTACAGAGTACACAAGCAATAGTCTTGCCATCATAACATATATTAACAAGGCTATAAACACTCTCAATTTGAGGCGTTTAATGAGTTTACCTTATGAAAATGAAACACCAAAATGGTTTCATTCAAAAGATAGGAAGCTACTTAGTACAAAGGATTTAAGATCAAAAGCTGATATTGTTGTTGCTAAAGATGGTAGTGGAAAATATAAAACTATATCTGATGCACTTAAACATGTTCCTAATAAGAGTAAAAAGAGGACTTTGATCTATGTGAAGAAAGGGATTTACTATGAAAATGTGAGAGTTGAAAAGACTAAATGGAATGTGATGATTATTGGTGATGGTATGACTTCTTCAATTGTATCTGGCAAGCTTAATGTTGTGGATGGTACACCAACATTTTCAACTGCAACATTTGCTGTGTTTGGAAGGAATTTCATAGCAAGAGACATGGGTTTTCGCAATACAGCAGGTCCACAAAAGCACCAAGCAGTAGCACTAATGACAAGTGCTGATCAAGCGGTTTATTATAAGTGTCACATTGATGCATATCAAGACACTCTTTATGCTCATTCCAATCGCCAATTTTATAGAGAATGCAACATTTATGGAACAGTTGATTTCATTTTTGGAAATTCAGCTGTTGTGATTCAAAACTGCAACATTATGCCTAAGTTACCTATGCATGGACAACAGATCACTATCACAGCACAAGGAAAAACTGACCCTAACATGAACACAGGTATCTCAATTCAATATTGTAACATTTCACCTTATGGAAACTTGAGTAATGTTAAAGTATATCTTGGAAGACCATGGAAGAATTACTCAACCACAGTTTACATGAGAACAAGAATGGATGGTTTTATTAATCCAAATGGTTGGTTACCTTGGGTAGGAAACTCAGCACCAGATACAATTTTTTATGCAGAATTTCAGAATGTTGGACCAGGTTCTGTAACAAAGAATAGAGTGAAGTGGAAGGGTTTGAAAAATATTTCTAGTAAACAAGCTAGTAAGTTTTCAGTCAAGGCTTTTCTTCAAGGAGATAGATGGATTCCTGCATCAGGTGCACCTTTTAGGTCTAATATATGA 1725 0.3432 MSFFKSYGKVDEHDQMMLEAKRKTRKRITIISLSSIIFIGVVIAAVLGVVNSKNDDDNNNNASQNSVTNSMKAVCDVTLYKDSCYNSLSSIVGSGKEVQPEELFKLSINVALTHVSKAVEYFNEHGVFKKLIENSRTNEALKNCRVLLDLAIDHLNNTLTASRENSSLHQVFDDLQTWLSAAGTYQQTCIEGFEDTKEQLKTSVTSYLKNSTEYTSNSLAIITYINKAINTLNLRRLMSLPYENETPKWFHSKDRKLLSTKDLRSKADIVVAKDGSGKYKTISDALKHVPNKSKKRTLIYVKKGIYYENVRVEKTKWNVMIIGDGMTSSIVSGKLNVVDGTPTFSTATFAVFGRNFIARDMGFRNTAGPQKHQAVALMTSADQAVYYKCHIDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIMPKLPMHGQQITITAQGKTDPNMNTGISIQYCNISPYGNLSNVKVYLGRPWKNYSTTVYMRTRMDGFINPNGWLPWVGNSAPDTIFYAEFQNVGPGSVTKNRVKWKGLKNISSKQASKFSVKAFLQGDRWIPASGAPFRSNI* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0233 574 PANTHER PECTINESTERASE 5 572 - -
Mtr3g0233 574 Gene3D - 263 574 IPR012334 -
Mtr3g0233 574 SMART PMEI_2 66 221 IPR006501 GO:0004857
Mtr3g0233 574 Pfam Plant invertase/pectin methylesterase inhibitor 70 221 IPR006501 GO:0004857
Mtr3g0233 574 CDD PMEI-like_3 73 227 - -
Mtr3g0233 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 227 IPR035513 -
Mtr3g0233 574 PANTHER PECTINESTERASE 5 572 - -
Mtr3g0233 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 64 224 IPR006501 GO:0004857
Mtr3g0233 574 Pfam Pectinesterase 268 560 IPR000070 GO:0030599|GO:0042545
Mtr3g0233 574 SUPERFAMILY Pectin lyase-like 265 571 IPR011050 -
Mtr3g0233 574 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Mtr3g0233 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 225 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0233 Mtr-Chr3 2592386 2597672 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0233 7 574 Carbohydrate Esterase AT3G10710 56.469 0.0 674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0233 3 2592386 2597672 Mtr8g1335 8 16456482 16459073 PCT