Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g0232 ATGTCACCTTCACTTTCCCTTCTCCTTTTCATCCTCTTAGCACCCTTATTACTCCTAGCTCAATCTCCTCCACCTTCTCCTTCTCCTCCTCCTCCTTCATCTTCTTCTGCCGCGTGCAAAACGACATTGTATCCGAAACTATGTCGCTCAATGCTATCCGCAATTCGTTCATCACCATCAGATCCATATAACTATGGAAAATTCTCCATAAAGCAAAACCTAAAAGTAGCAAGAAAACTAGAAAAAGTGTTCATAGATTTCCTCAATCGCCACCAATCATCTTCATCATTAAACCATGAAGAAGTTGGTGCATTAGTTGATTGCAAAGACCTTAACTCACTAAATGTAGATTACTTAGAATCCATTTCTGATGAACTAAAATCAGCTAGTTCTTCTTCTTCATCATCAGATACAGAACTAGTTGATAAAATTGAAAGCTATCTAAGTGCTGTAGCTACTAACCATTACACTTGCTATGATGGTTTGGTTGTGACAAAAAGTAACATTGCTAATGCTCTTGCTGTTCCATTGAAAGATGCTACACAATTTTACAGTGTTTCACTTGGATTGGTTACTGAGGCTTTGAGTAAAAATATGAAAAGGAATAAGACACGCAAACATGGTCTTCCTAATAAGTCCTTCAAAGTTAGGCAACCACTTGAGAAGTTAATCAAGCTTCTCCGCACAAAATATAGTTGCCAAAAAACATCCTCAAATTGTACAAGCACAAGAACAGAAAGGATTCTTAAAGAAAGTGAAAGCCATGGAATTCTACTAAATGACTTTGTACTTGTGAGTCCTTATGGGATAGCCAACCACACTTCCATTGGAGATGCTATTGCTGCTGCACCAAATAACACAAAACCAGAAGATGGTTATTACCTTATCTATGTTAGAGAAGGATACTATGAGGAATATGTTATTGTTCCTAAACACAAGAATAATATCCTTTTAGTTGGAGATGGTATTAATAACACAATCATTACAGGGAACCATAGTGTCATTGATGGTTGGACAACTTTCAATTCTTCCACATTTGCTGTTTCTGGAGAAAGATTTATAGCAGTAGACATTACATTCAGAAACACAGCTGGACCTGAAAAACACCAAGCAGTAGCAGTGAGAAACAACGCCGACCTCTCAACATTCTACAGATGCAGTTTCGAGGGATATCAAGACACGCTCTATGTCCACTCTTTAAGACAATTCTACAGAGATTGCAAAATCTATGGCACCGTCGACTTCATTTTCGGCAACGCAGCTGTAGTTTTCCAAAATTGTAACATCTATGCTAGAAAACCATTGCCAAATCAGAAAAATGCTGTCACAGCTCAAGGTAGAACTGATCCAAATCAAAACACTGGAATTTCAATCCAAAATTGCACGATCGATGCGGCACAAGATTTGGCTAATGACTTAAATTCAACAATGAGTTACTTAGGTAGACCATGGAAGATTTATTCAAGAACAGTTTATATGCAATCATATATCGGCGATTTTGTTCAACCTTCTGGTTGGTTAGAGTGGAATGGAACAGTTGGATTAGACACTATTTTCTATGGTGAATTTAATAACTATGGACCTGGTTCTGTAACTAACAATAGGGTACAATGGCCTGGTCATTTTCTTTTGAATGATACTCAAGCTTGGAATTTTACAGTACTTAACTTTACTTTGGGAAATACTTGGCTTCCTGATACAGATATACCTTACACTGAAGGATTACTCAACTAG 1734 0.3743 MSPSLSLLLFILLAPLLLLAQSPPPSPSPPPPSSSSAACKTTLYPKLCRSMLSAIRSSPSDPYNYGKFSIKQNLKVARKLEKVFIDFLNRHQSSSSLNHEEVGALVDCKDLNSLNVDYLESISDELKSASSSSSSSDTELVDKIESYLSAVATNHYTCYDGLVVTKSNIANALAVPLKDATQFYSVSLGLVTEALSKNMKRNKTRKHGLPNKSFKVRQPLEKLIKLLRTKYSCQKTSSNCTSTRTERILKESESHGILLNDFVLVSPYGIANHTSIGDAIAAAPNNTKPEDGYYLIYVREGYYEEYVIVPKHKNNILLVGDGINNTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRDCKIYGTVDFIFGNAAVVFQNCNIYARKPLPNQKNAVTAQGRTDPNQNTGISIQNCTIDAAQDLANDLNSTMSYLGRPWKIYSRTVYMQSYIGDFVQPSGWLEWNGTVGLDTIFYGEFNNYGPGSVTNNRVQWPGHFLLNDTQAWNFTVLNFTLGNTWLPDTDIPYTEGLLN* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g0232 577 Gene3D - 262 577 IPR012334 -
Mtr3g0232 577 CDD PMEI-like_3 37 193 - -
Mtr3g0232 577 SMART PMEI_2 30 190 IPR006501 GO:0004857
Mtr3g0232 577 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 194 IPR035513 -
Mtr3g0232 577 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Mtr3g0232 577 SUPERFAMILY Pectin lyase-like 261 574 IPR011050 -
Mtr3g0232 577 PANTHER PECTINESTERASE 5 575 - -
Mtr3g0232 577 Pfam Pectinesterase 263 560 IPR000070 GO:0030599|GO:0042545
Mtr3g0232 577 PANTHER PECTINESTERASE 5 575 - -
Mtr3g0232 577 Pfam Plant invertase/pectin methylesterase inhibitor 36 189 IPR006501 GO:0004857
Mtr3g0232 577 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 183 IPR006501 GO:0004857
Mtr3g0232 577 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 192 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g0232 Mtr-Chr3 2586662 2591942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g0232 4 577 Carbohydrate Esterase AT3G10720 56.866 0.0 697
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0232 3 2586662 2591942 Mtr8g1336 8 16460233 16463106 PCT