Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3335 ATGGTTTTCTCTTCTATTCCATCTTATTTAGATCCTCTCAATTGGCAGCAACAACCTAATCAACATCAGTTACTTCCACCACTATCCTCATCACAGGTACATGGTGCAGGCTCAATTATCAGGCCTGGTTCGATACCGGATCAAGCTCAAGCTCAGGCAGCTCATGAAGTTCATACAGGTCAGGTTCAAACTCACCAAGCTAAGTTACCACCACCTTCAGAGACAAATTTGAAGTGTCCTCGTTGCGAATCAACCAATACAAAATTTTGTTACTACAACAACTATAACTTGTCTCAACCAAGACACTTTTGCAAGACATGTAGGCGTTATTGGACAAGAGGGGGTGCATTAAGAAATGTTCCTGTTGGTGGAGGGTGTCGTAGAAGCAAAAAGACCAAAAAGAGTAACACCTCTTCTACTCCCTCCAAATCTCCAATATCAAATAGTAATGACAAAGATTATTCAACAAGTGCAAGTGCAATCCATTCAACTTCAACTCCTCTTGGTGAATTCTTACACCCAACTAATAGACCTAATTACATGACATCTCTTCAGAATCTGAACCGGTTCGGTGTTGGAAATATGTTTCAAATTGGTGATTATAGTTCAACTACTGGTGGAGGAGAAGGAGGAGTTGTCGATCAGTGGAGATTTCAGCAGTTTCCTTTCATGAATAATGGCTTTGATTCAAGTACTTCAAATGTTTCTTTCCCATTTCAAAGTGAAATTGTTGAACCAACAACTACTTCTAGGGTTACTACTTTGATGCCTGCATCGGTTAAATCGGAACACAACGGAGGTTTTAATCTTCTTAGATCTCCAATGAATATGTCAGAGAATAACAACCATTACAATAATTCATGGAATGATTTTCATGGTCTTGCATCTTCTTCGGCTAGTCGTCTGTTATAA 912 0.3936 MVFSSIPSYLDPLNWQQQPNQHQLLPPLSSSQVHGAGSIIRPGSIPDQAQAQAAHEVHTGQVQTHQAKLPPPSETNLKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKTKKSNTSSTPSKSPISNSNDKDYSTSASAIHSTSTPLGEFLHPTNRPNYMTSLQNLNRFGVGNMFQIGDYSSTTGGGEGGVVDQWRFQQFPFMNNGFDSSTSNVSFPFQSEIVEPTTTSRVTTLMPASVKSEHNGGFNLLRSPMNMSENNNHYNNSWNDFHGLASSSASRLL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3335 303 MobiDBLite consensus disorder prediction 135 160 - -
Mtr2g3335 303 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Mtr2g3335 303 MobiDBLite consensus disorder prediction 121 160 - -
Mtr2g3335 303 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 300 IPR045174 GO:0003700|GO:0006355
Mtr2g3335 303 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Mtr2g3335 303 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 28 300 - -
Mtr2g3335 303 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3335 Mtr-Chr2 47440054 47441924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3335 1 297 C2C2-Dof Transcription Factor Family AT2G37590 35.754 7.56e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr2g3335 zf-Dof 2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3335 - - cam:101511165 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3335 2 47440054 47441924 Mtr2g3335 2 47440054 47441924 ECH
Mtr2g3335 2 47440054 47441924 Mtr4g1865 4 31808583 31810316 PCT