LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr2g2420	ATGATGATGGGAGTATCTTCAACAACTGCAACATTCTTTCTCATAGTTGCACCTTTGGTGCTTCTATGGACATGGAAGCTACTGAATTGGCTATGGCTAAGGCCAAAGAGAATAGAGAAGGTACTGAGAGCACAAGGCCTTCAAGGCAGTCCATACAAAATTTTGGTTGGAGACACAAGGGAGATGATTAAGATGATGATGGAAAATGCTAAATCTCCAATATTCACTAATTCTCTTTCAGATGATAAAGATGTGACACCACACATCTTCACATTTATTCATCACATTTATCAAAAATTTGGCAAGAATTCTTTTTTATGGGAAGGTACAAATGCCAAAGTGATCATTACAAACCCTGAGCAAATTAAGGAAATCTTCAACAACATGAATGACTTTCAGAAACCGAAGTTGAGCCCCCTTTACAAGCTACTGGGAACAGGACTTGCAAATTATGAAGGCGAAAAATGGCGGATGCATCGAAAGATTATCAACCCTGCTTTCTACACAGAAAAATTGAAGATTATGTCACCTATATTTTCCCAAAGTTGTGATGAAATGATTAGAAAATGGGAAGATATATCTTCAGATGGAAAGTTCGAAATCGATGCAAAGACTTTTCTCCAGATTTTGACGTGTGATGTCATATCGAAAACAGCGTTTGGAAGCAATTATGAAGAAGGACAAAGAATATTTGAACTACTAAAAGAACAAGCTCAACTTATTATGAAATTACGCAACGTTTACATTCCAGGATGGAGGTATATACCAACAACTACACACAGGAGGATGACAGAAATCGACAAAGATATCCAAGCATCGCTAATGGCTATAATCAACAAAAGAAAGAAAGCCATGATGGCTGGTGAAGTCCTAAACAACGATTTACTAGGTATACTTTTGGAATCAAATCAGAAAGAAATACAAGAAAATGGAAACAATAAGAATGTTGGAATGAGCGACCAAGAAGTACTCGAGGAATGCAATGCATTCTATCTAGGAGGCCAAGAATCCACATCAGTTCTGCTTGTTTGGACAATGATATTGTTGAGTAGATATCCTGATTGGCAAGCACGAGCTAGAGAGGAAGTTTTGCAAGTTTTTGGCGACAAAATGCCTAACAGCGATGGAATAAGTCGCCTTAAAATAGTGACAATGATTCTCTATGAGGTACTAAGGTTATACCCACCGGTAATTTACTTCAATCGAGTAGCTCGCAAAGATGTGAAAGTTGGAAGTCTTTTCCTCCCCGCAGGAGTACATGTTTCCTTACCAATACTCTTAATTCACCACAATCGCGATATTTGGGGAGATGATGCCACTGAGTTCAATCCAGAGAGATTTTCGGAAGGAATCGCAAAAGCAACAAAAGGCCAAGTTTGTTTTTTCCCATTTGGTTATGGTCCTAGAGTTTGCATGGGGCAAAACTTTGCTTTATTAGAAGCAAAGATGGTTTTGTCACAACTTCTACAACGTTTCTCATTTGAACTTTCCCCTAACTATGTTCATGCTCCAACAACTGTATTCACTCTTAATCCAAAACATGGGGCTCATATCATTTTCCACAAATTATAG	1572	0.381	MMMGVSSTTATFFLIVAPLVLLWTWKLLNWLWLRPKRIEKVLRAQGLQGSPYKILVGDTREMIKMMMENAKSPIFTNSLSDDKDVTPHIFTFIHHIYQKFGKNSFLWEGTNAKVIITNPEQIKEIFNNMNDFQKPKLSPLYKLLGTGLANYEGEKWRMHRKIINPAFYTEKLKIMSPIFSQSCDEMIRKWEDISSDGKFEIDAKTFLQILTCDVISKTAFGSNYEEGQRIFELLKEQAQLIMKLRNVYIPGWRYIPTTTHRRMTEIDKDIQASLMAIINKRKKAMMAGEVLNNDLLGILLESNQKEIQENGNNKNVGMSDQEVLEECNAFYLGGQESTSVLLVWTMILLSRYPDWQARAREEVLQVFGDKMPNSDGISRLKIVTMILYEVLRLYPPVIYFNRVARKDVKVGSLFLPAGVHVSLPILLIHHNRDIWGDDATEFNPERFSEGIAKATKGQVCFFPFGYGPRVCMGQNFALLEAKMVLSQLLQRFSFELSPNYVHAPTTVFTLNPKHGAHIIFHKL*	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr2g2420	523	Pfam	Cytochrome P450	74	499	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	Gene3D	Cytochrome P450	33	523	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PANTHER	11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED	14	519	-	-
	Mtr2g2420	523	PRINTS	E-class P450 group I signature	97	116	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PRINTS	E-class P450 group I signature	210	228	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PRINTS	E-class P450 group I signature	322	339	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PRINTS	E-class P450 group I signature	342	368	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PRINTS	E-class P450 group I signature	425	449	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PRINTS	E-class P450 group I signature	461	471	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PRINTS	E-class P450 group I signature	471	494	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	SUPERFAMILY	Cytochrome P450	85	521	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	464	473	IPR017972	GO:0005506\|GO:0016705
	Mtr2g2420	523	PRINTS	P450 superfamily signature	333	350	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PRINTS	P450 superfamily signature	385	396	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PRINTS	P450 superfamily signature	462	471	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PRINTS	P450 superfamily signature	471	482	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr2g2420	523	PANTHER	CYTOCHROME P450 FAMILY MEMBER	14	519	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr2g2420	Mtr-Chr2	36422098	36426587	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr2g2420	1	523	Cytochrome P450	AT3G14690	52.091	0.0	574

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr2g2420	2	36422098	36426587	Mtr2g2420	2	36422098	36426587	ECH