Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2380 ATGGTGCTATTATCCAAACCATCATCAGAACAATACACCTATGTTAGGAACAACATGCAAGCAACTACATTTTCCTCATCAATTCCTCTTGTTGACCTATCAAAACCAGATGCAAAGAGCCTCATAGTAAAAGCTTGTGAAGATTTTGGATTCTTCAAAGTCATAAACCATGGAATCCCTATGGAAGCTATATCCCAATTGGAATCTGAGGCCTTCAAATTTTTCTCTCTCCCTCTAACAGAGAAAGAAAAAGCTGGTCCTGCAAATCCATTTGGGTATGGTAACAAAAGGATTGGACCCAATGGTGATGTTGGTTGGGTTGAATACCTTCTTCTCAATACCAATCAAGAACATAATTTCTCTCTTCATGGCAAAGACATAGACAAATTTAGGTGTTTGTTGAATGATTATAAGTGTGCTATGAGGAATATGGCATGTGAGATACTTGATTTGATGGCAGAAGGGTTAAAGATTCAACCAAAGAATGTGTTTAGCAAGCTTGTGATGGATAAACAGAGTGACTCTGCTTTTAGGGTTAATCATTACCCTGCTTGTCCTGAATTAGCTATAAATGGTGAAAATTTGATTGGGTTTGGAGAACACACAGACCCTCAAATTATATCACTTTTGAGGTCAAATAATACTTCAGGATTTCAAATTTCTCTTAGAGATGGAAGTTGGATTTCAGTCCCACCTGATCATAGATCCTTCTTCATCAATGTTGGTGATTCTCTTCAGGTTATGACTAATGGGAGGTTCAAAAGTGTGAGACATAGAGTTTTGGCAAATGGTATCAATCCAAGGCTCTCAATGATTTACTTTGGTGGACCACCTTTGAGTGAGAAAATAGCACCATTGCCTTCACTCATGAAAGGAAATGAAAGCTTGTACAAAGAATTTACATGGTTTGAGTACAAGAATTCTACTTATGGAACAAGATTGGCTGACAATAGGCTGGGAAATTATGAAAGGATTGCTGCCTCCTAA 987 0.3769 MVLLSKPSSEQYTYVRNNMQATTFSSSIPLVDLSKPDAKSLIVKACEDFGFFKVINHGIPMEAISQLESEAFKFFSLPLTEKEKAGPANPFGYGNKRIGPNGDVGWVEYLLLNTNQEHNFSLHGKDIDKFRCLLNDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDSAFRVNHYPACPELAINGENLIGFGEHTDPQIISLLRSNNTSGFQISLRDGSWISVPPDHRSFFINVGDSLQVMTNGRFKSVRHRVLANGINPRLSMIYFGGPPLSEKIAPLPSLMKGNESLYKEFTWFEYKNSTYGTRLADNRLGNYERIAAS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2380 328 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 10 324 - -
Mtr2g2380 328 SUPERFAMILY Clavaminate synthase-like 27 320 - -
Mtr2g2380 328 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 172 277 IPR005123 -
Mtr2g2380 328 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 324 - -
Mtr2g2380 328 Pfam 2OG-Fe(II) oxygenase superfamily 174 275 IPR044861 -
Mtr2g2380 328 PRINTS Isopenicillin N synthase signature 42 59 - -
Mtr2g2380 328 PRINTS Isopenicillin N synthase signature 201 222 - -
Mtr2g2380 328 PRINTS Isopenicillin N synthase signature 237 263 - -
Mtr2g2380 328 Pfam non-haem dioxygenase in morphine synthesis N-terminal 28 114 IPR026992 -
Mtr2g2380 328 Gene3D - 4 313 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2380 Mtr-Chr2 35942307 35945045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2380 31 305 Glycosyltransferase AT5G59530 25.939 1.08e-22 95.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2380 2 35942307 35945045 Mtr2g2380 2 35942307 35945045 ECH