Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2347 ATGGAAGAACCAACATTTCTATTCCCACCCCCTGATTCCGACCTCGACCTCAGCTTCACCAGCACCACCACTGAACGCACCTTCACCTCCTCAGCACGCACCAGCTTAGCCCGAACAAGCAGCCTTGCTCTTAGTTTCAACGACCGTCTCTCCACCGCCTCCACCGCCGGAGACACCGTCTCATCCGCTGTCATCCGCCGTCCTCACCGAAGCTCAGACTCCAACTGGACAGCAATAAAAGCAGCCACCAATCTCTCCTCTGATGGGAGACTTCATCTCCGTCATTTAAAGCTTATCCGCCACCTTGGCTCCGGTGACCTCGGCCGTGTGTTTCTATGTCGCCTCCGTGACTACGACGGTGCAAATTTTGCACTTAAGGTTGTTGATAAAGACCTTCTTACTCCTAAGAAATTCTCTCACGCGGAAACGGAGGCGGAGATTCTTCACGCGCTGGATCATCCTTTTTTACCGACGCTCTATGCGCGGATCGATGTTTCTCACTACACGTGCCTCCTTATTGACTATTGTCCCGGCGGTGATCTCCACGCTCTTCTACGTAAACAGCCGGGGAACCGACTCACAATTTCGGCGGCGAGGTTTTTCGCTGCCGAGATTCTTGTTGCTCTCGAGTATCTTCACGCGCTTGGCGTGGTATACCGTGACTTGAAACCTGAGAATGTACTTCTACGCGAAGATGGACACGTCATGCTTTCAGATTTTGACCTTTGCTTTAAAGCTGACGTGACACCTACTTTCGAATGTTGCAAAGTTAACAAACACTATGCGGGTCCCACTTACGGTTGTTTCGGTTGTAACGGATCAAGATCTCGCGATTCTCGAGAGAAAGTCGTTGCTGATTTTGTTGCAGAACCAACTACGGCATTTTCAAGATCGTGTGTTGGGACACATGAGTATTTAGCACCGGAGCTTGTTTCGGGTAATGGTCACGGTAATGGCGTGGATTGGTGGGCTTTTGGGGTGTTTATTTACGAGTTGTTGTACGGAATGACACCATTTAAAGGATGTAGTAAAGAGGGCACGCTACGCAATATAGCATCTAACAATGATGTGAAGTTCCACGTAGCGGAGAATGAAGAGGTAGGGATGGTAGAAGCGAGAGATTTAATAGAGAAGTTGTTAGTGAAGGATCCTAAAAAGAGGTTAGGGTGCGTCAGAGGCGCGACCGACGTGAAACGACACCCCTTTTTTGATGGGATTAAGTGGCCTTTGATTAGGACCTATAAGCCACCGGAGGTAAAGGGACTATTGAGGAGGAAAAAATCAGATTTGATTGTAACAAGTAAGAAAATTAGGAAAGGGTGGTGGAAGAGGCTTGGATGTGCATTGAGAAATAAAGGAGCTAGATTTGATTTACTTTCAAACTATAGTAATAATAATCATTATTGTTACGTTAATAATAGTAAGGTTAGGTAA 1434 0.4728 MEEPTFLFPPPDSDLDLSFTSTTTERTFTSSARTSLARTSSLALSFNDRLSTASTAGDTVSSAVIRRPHRSSDSNWTAIKAATNLSSDGRLHLRHLKLIRHLGSGDLGRVFLCRLRDYDGANFALKVVDKDLLTPKKFSHAETEAEILHALDHPFLPTLYARIDVSHYTCLLIDYCPGGDLHALLRKQPGNRLTISAARFFAAEILVALEYLHALGVVYRDLKPENVLLREDGHVMLSDFDLCFKADVTPTFECCKVNKHYAGPTYGCFGCNGSRSRDSREKVVADFVAEPTTAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGMTPFKGCSKEGTLRNIASNNDVKFHVAENEEVGMVEARDLIEKLLVKDPKKRLGCVRGATDVKRHPFFDGIKWPLIRTYKPPEVKGLLRRKKSDLIVTSKKIRKGWWKRLGCALRNKGARFDLLSNYSNNNHYCYVNNSKVR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2347 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mtr2g2347 477 PANTHER FLIPPASE KINASE 1-RELATED 11 434 - -
Mtr2g2347 477 Gene3D Transferase(Phosphotransferase) domain 1 180 255 - -
Mtr2g2347 477 Gene3D Transferase(Phosphotransferase) domain 1 296 417 - -
Mtr2g2347 477 SUPERFAMILY Protein kinase-like (PK-like) 75 419 IPR011009 -
Mtr2g2347 477 Gene3D Phosphorylase Kinase; domain 1 95 179 - -
Mtr2g2347 477 SMART serkin_6 96 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2347 477 PANTHER TELOKIN/MYOSIN LIGHT CHAIN KINASE-RELATED 11 434 - -
Mtr2g2347 477 CDD STKc_phototropin_like 94 419 - -
Mtr2g2347 477 Pfam Protein kinase domain 98 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2347 477 Pfam Protein kinase domain 296 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g2347 477 ProSiteProfiles Protein kinase domain profile. 96 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2347 Mtr-Chr2 35484007 35485686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2347 12 471 AGC Kinase Gene Family AT1G53700 65.598 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mtr2g2347 Pkinase 1e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2347 2 35484007 35485686 Mtr2g2347 2 35484007 35485686 ECH