Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2346 ATGGAAGATAATGAATTGAATCTCTATGATCATGACCCTCTTCTTCTAAATGATGCTTCTTTTCAACAACAACAACAAGAAATCACTTCCACTAGAGTTTTAAAATCATCATTTAGCTCTCTGAATTCAGCTATGGAGGCAGCAGATCCTCAATCATGTGGTGGAAACCCTAGTTATGGATTGTGTGTGAAAAATGGAAGCTCTGAGAGGAACAGCTTGCAATTTGATGACCCAATTGTGAAAAATTTGGTCGACAATGGACGGTCGATATTAGGGTTTTCGATGACTTCACCAGATTTGGTGATCTGTTCTGCCTCACCAGATAATGCTGGAATCAGTTATTGTGATTCTCCTGAATTGTTTAAGAAGAACAAAAATTGCTACAATTTGGATTCATCTATGGAGCTTTCTCTTGAGAATGGAATCAATGGACCTGAAGTTGAAGTTTACAATGTCCATAAGACTCCAACTGTTAAATTCTCCAATGTGTGTCAGACTATTGAACCAGAGGAAGAATTAGTATCACCTGAAGCTTCCTTTGAGCTTCATCCACCGCCGGTAACTAAAGACGACGAGTCGCCCCGAGACTACTCTCTAAACGATGATGAAATGTTAGAAGATGGTAGAGTGTCTCAGGAGACAGAGTCGGAGGGCTCGGAAGATGAAGAGGATATTGGGGTAGAAGAGAAGTTTCAGAAGCTGAAAAGAGATTTTGAGTGTCAGAGAAAAGAGCTGGCAGTAACAAGGAGGGAGTTGGGGGAGCTCAAGAGGGAGAATCATAAAAAAAGTAGTGAATGTCAAGAAGCTTTCAACTCCTTAAACGAGCTTCAGAATGAGCTAATGCGCAAGTCGATGCACGTAGGATCTTTAGCATTTGCTATTGAGGGGCAAGTGAAAGAGAAAAGCAAGTGGTTTACATCACTGAGAGACTTGATGAGGAGATTGAAGATTATGAAAATGGAGCACATGAAGCTATTAGAAGAAGCAGAAGCATACAAGAAATATGAAGCAGATATAAGTGAAATGGGACTCATAATCAAATCTAAAATGAATGAACAAATAGAGTTGCATGAAGATCTCAAGTCCAAATATGTTGAAGGTGCCAAGGTTCAAAAAGAGCTTTATAATAAGGTATTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCTCTCAATGCCGAAGAGATGAAAGGAGGAGCCTCAATGGCCTTAGATTTTGATTCTGCTAAAGATGGCGAGCTTACTGTACTGTCAAATGGATCTCCAAAAAAGACTTTTAAATTTGATGCTGTCTTTGGCCCTCAAGTTGAACAAGCTGATATCTTTGAGGACACAGTACCATTTGCAACCTCAGTATTAGATGGATACAATGTATGCATTTTTGCATATGGACAGACTGGTACTGGAAAAACCTTCACAATGGAGGGTACTGAAGAGGCTCGAGGAGTTAATTTCAGGACTCTTGAGAAAATGTTTGATATAATCAAGGAAAGACAGAAGGTCTATCGTTATGATATCTCCGTAAGTGTCTTAGAAGTGTACAATGAGCAAATAAGAGATTTGCTGGTTTCTGGAAATCATCCAGGAATGTCTGCTAGAAGATTGGAGATAAGGCAAGCTGGTGAAGGAATGCATATTCCAGGGTTGGTTGAGGCACATGTGAACAATATGACTGAAGTGTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCTGTAAGCTCAACGAATGCGAATGAGCACAGTAGCCGATCTCACTGCATTCACTGTGTCATGGTTAAGGGAGAAAATTTGTTGAATGGAGAACACACTAGAAGCAAGTTATGGCTTGTGGACTTAGCAGGCAGTGAAAGAGTTGCAAAGACAGAAGTGCAAGGTGATAGATTGAAGGAGACACAAAATATTAATAGGTCTCTTTCTGCACTTGGTGATGTCATTTCAGCTCTTGCAACTAAAAGTTCACACATCCCATTCAGGAACTCCAAGCTTACACACTTGCTGCAAGACTCATTAGGAGGAGATTCAAAGACACTCATGTTTGTACAGATCAGTCCTAATGAAAATGATTTGGGCGAGACCATTTGCTCTTTGAATTTTGCTAGTAGAGTAAGGGGAATAGAATTGGGCCCTCCAAAAAAGCAGTGGGACACAATTGAACTTCTGAAACACAAACAGATGGCTGAGAAAACTAAACAAGAGCTGAAACTGAAGGATTTTCAAATCAAGAAGATGGAGGAAACAATCCATGGATTCGAGTCCAAAATGAAGGAGAAGGATCATAAAAACAAAACTCTTCAAGATAAGGTGAAGGAGCTGGAATCACAACTTATGATTGAGAGAAAACTAGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCAAATGAAACACCAAGAAGAGCAAAACAATTCAATTTTGAGATCAACATCACTTACGAATCGACCATTAGCAACTCTCAAGAATTTTAATGATCCAGCAAAACCCTTAATGGAGAACATCTTAAAACCTTACAGCATACCCTTTTCTACAATAGAAAGCTCCATCAAGTGCATTGATCACAGTGAGAAAGAAAACAATCCCGACTTGGCCGATAATAAATCGCTACTTCCAAAAAGGGCATCAAGAGCTTCTATGTGTACAATGATGACACCGCGCATTCCTTCAGCAGCTACTTCAAGGAGAAACTCTCTAATTCCACTCCCAAGCTTAACACAGTTTCAAACACCATTCATTCCCAAGTTATCAAACCAAGAAATGAACGAGGAATCAGAAACCACCAACTGTTCACAACCATTACAACAAGGTCATAGTGAGAGTCCAAAAGAAGTTAAAAGTGGTGTTAAGAAGATAGGTAGCATACTAAGAAGAAGCATACATAAGAAAGGTCAAGTGAGGTCTCCACTACAACACCACATGAGAAAAGTTGGTGGTGTAAATGTAGGGATGGAGAAAGTGAGAGTCTCTATTGGAAGTAGAGGAAAATTGGCACAAAGGGTGCAAGTTGGAAATGGTAGTAGAAGAGGTGGTGGAGCTAAAGAGACTCAACACAAGAATAGTCACAAGGACAAGGAAAGGGCATGGATATAA 3102 0.402 MEDNELNLYDHDPLLLNDASFQQQQQEITSTRVLKSSFSSLNSAMEAADPQSCGGNPSYGLCVKNGSSERNSLQFDDPIVKNLVDNGRSILGFSMTSPDLVICSASPDNAGISYCDSPELFKKNKNCYNLDSSMELSLENGINGPEVEVYNVHKTPTVKFSNVCQTIEPEEELVSPEASFELHPPPVTKDDESPRDYSLNDDEMLEDGRVSQETESEGSEDEEDIGVEEKFQKLKRDFECQRKELAVTRRELGELKRENHKKSSECQEAFNSLNELQNELMRKSMHVGSLAFAIEGQVKEKSKWFTSLRDLMRRLKIMKMEHMKLLEEAEAYKKYEADISEMGLIIKSKMNEQIELHEDLKSKYVEGAKVQKELYNKVLELRGNIRVFCRCRPLNAEEMKGGASMALDFDSAKDGELTVLSNGSPKKTFKFDAVFGPQVEQADIFEDTVPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIKERQKVYRYDISVSVLEVYNEQIRDLLVSGNHPGMSARRLEIRQAGEGMHIPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGEHTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKTLMFVQISPNENDLGETICSLNFASRVRGIELGPPKKQWDTIELLKHKQMAEKTKQELKLKDFQIKKMEETIHGFESKMKEKDHKNKTLQDKVKELESQLMIERKLARQHVDSKIAEQHQMKHQEEQNNSILRSTSLTNRPLATLKNFNDPAKPLMENILKPYSIPFSTIESSIKCIDHSEKENNPDLADNKSLLPKRASRASMCTMMTPRIPSAATSRRNSLIPLPSLTQFQTPFIPKLSNQEMNEESETTNCSQPLQQGHSESPKEVKSGVKKIGSILRRSIHKKGQVRSPLQHHMRKVGGVNVGMEKVRVSIGSRGKLAQRVQVGNGSRRGGGAKETQHKNSHKDKERAWI* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2346 1033 MobiDBLite consensus disorder prediction 171 228 - -
Mtr2g2346 1033 Gene3D Kinesin motor domain 379 752 IPR036961 -
Mtr2g2346 1033 Coils Coil 730 785 - -
Mtr2g2346 1033 Coils Coil 231 279 - -
Mtr2g2346 1033 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 218 1017 - -
Mtr2g2346 1033 Pfam Kinesin motor domain 390 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g2346 1033 PANTHER KINESIN-LIKE PROTEIN KLP-3 218 1017 - -
Mtr2g2346 1033 SMART kinesin_4 382 717 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g2346 1033 MobiDBLite consensus disorder prediction 922 945 - -
Mtr2g2346 1033 ProSiteProfiles Kinesin motor domain profile. 384 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g2346 1033 MobiDBLite consensus disorder prediction 1004 1033 - -
Mtr2g2346 1033 ProSitePatterns Kinesin motor domain signature. 609 620 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr2g2346 1033 PRINTS Kinesin heavy chain signature 458 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g2346 1033 PRINTS Kinesin heavy chain signature 579 596 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g2346 1033 PRINTS Kinesin heavy chain signature 610 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g2346 1033 PRINTS Kinesin heavy chain signature 659 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr2g2346 1033 MobiDBLite consensus disorder prediction 184 215 - -
Mtr2g2346 1033 CDD KISc_C_terminal 382 711 - -
Mtr2g2346 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 747 IPR027417 -
Mtr2g2346 1033 MobiDBLite consensus disorder prediction 922 949 - -
Mtr2g2346 1033 MobiDBLite consensus disorder prediction 1015 1033 - -
Mtr2g2346 1033 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2346 Mtr-Chr2 35458938 35464896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2346 359 736 Calmodulin-binding Proteins AT5G65930 42.559 3.83e-79 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2346 2 35458938 35464896 Mtr2g2346 2 35458938 35464896 ECH