Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2345 ATGCTTATATTAGTTGGTAACGTGCAAGGAACATCAATGAGTTCTCTTGCTTCACCAATAAGTTTTGGTAGTTCTTCTAGAATGTCACATTCTGTTGTTAGAAGAGTTTCTCTTTCTAGTTCTAGAAGGAATTGTATAGGGAAAAAAAGATGGCATTGTGTTTCTTTGTCTGTTTGTAGATATTCAGTTACCACAACTGATTTTGTTGCAGACCAAGGAAATTCAGTTTCATCACTTGATTCTTCTAACAATGATGATAGTAATAATAAAGGTGGTGGTGATAGTGGTGGTGGTGTTGGTGGTAGTTTTGTACTTAAACCTCCTCCTAAGCCTGTCTTGAAGTCCAATAATGACTCGATTTTAGGATCGAGTTCGGGTTTAGGGGGTTCGACGAGGAATAGTGAGGGTGATGATGGTGTGGATGAGAGGAGTAAGGTGATTGAGTCACTTGGTGAGGTTTTGGAGAAGGCGGAGAAGTTGGAGACTTCTAAGTTAGGGGGTAAGAGAAGTAATGGTTCGGTTAATGAACCGGCAAGACCAGTTATGAATGATAAACCTAAGGATGATGAACCGGTGAATTCATTACAGAAACATAAGGCAAAGACTTTGAAGAGTATTTGGCGTAAAGGGGATTCGGTTGCGACTGTGCAGAAGGTTGTGAAGGAAGTACCTAAGCCTAGTGTTAAGAGTAGTGAAGTGGGGGAATCTCAAGTAGGGGGAGGGGAGAAGGTAATGTCTCAGTCGAGTGATCCTCAGCCTCTTTCGAGACCTCAACCGATGTTACAATCTAGGCCTTCGATAGCCCCGCCGCCACCGCCACCTGTTAAAAAGCCTGTTATCTTGAAGGATGATAAAGGTCAAGGTGAAACACCACCTGTTAAGTCTAAAGAAAGGAAGGGACCTATCTTGATTGATAAGCATGCTTCAAAGAAACCGGCAGTTGACCCTGTGATTGCTCGAACGGTTCTAGCTCCTACGAAACCAGGGAAGGCCCCTCCCCAAGGAAGGTATAAAGATGATTACCGGAAGAAAGGTGCTTCGTCTGGGGAAGGAGGACCAAGAAGACGAATGGTGGTGAACAAGGATGGTGTTCCTGACGAGGATACTTCGGAACGCAATGTCTCTATTCCCGGCACTGCAAGAAAAGGACGGAAATGGAGTAAAGCAAGTCGTAGGGCGGTACGACTTCAGGCTGCCAGGGATGCTGCTCCTGTAAAGGTTGAAATTCTAGAGGTCAGCGATAATGGTATGCTGGTGGAGGAATTGGCGTACAATTTGGCAATTACTGAAGGCGATATCCTCGGCTCTCTGTACTCCAAGGGAGTTAAGCCAGATGGGGTGCAAACTCTAGACAAAGATATGGTGAAGATGATTTGTAAAGATTATGATGTGGAAGTCATAGATGCCGATCCTTACAAAGTTGAAGGATTAGTGAAGAGAAGGGAAATTCTCGAAGAAGAAGACCTTGACAAACTCAAAGACAGGCCTCCTGTTATTACTATCATGGGCCATGTTGATCACGGCAAGACAACTCTTTTGGATCATATACGGAAGACTAAGGTTGCTGCTTCTGAAGCTGGTGGGATCACACAGGGAATTGGGGCTTATAAAGTGCAAGTACCTGTTGATGGAAAAACGTTGCCGTGTGTTTTTCTCGACACTCCTGGGCACGAGGCATTTGGGGCAATGAGAGCCCGTGGAGCAAGCGTAACAGACATTTGTATTATTGTTGTGGCTGCTGACGATGGTATTCGTCCTCAAACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTACCCATTATTATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGACCGAGTTATGCAAGAGCTTTCTTCAATTGGCTTGATGCCAGAAGACTGGGGTGGTGACATCCCGATGGTTCAGATAAGTGCTCTTCAAGGTCAGAATGTTGATGATCTTTTGGAAACTGTTATGCTTGTTGCCGAGTTGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCGAAGGGCACAGTCATTGAGGCAGGCATGGATAAATCAAAAGGACCATTTGCCACATTTATTGTGCAGAATGGGTCACTTAGAAGGGGAGATATTGTAGTTTGTGGAGGAGCTTTCGGAAAGGTGCGGGCTTTATTTGATGATGGTGGAAAGCGTGTCGATGTAGCTACACCTTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCAGTTGCTGGTGATGTATTTGAGGTTGTTGAATCCCTTGATACTGCACGTGAAAAGGCAGAGTCCCGTGTTATGTCATTGCGAGATGAGCGTATTTCAGCAAAGGCAGGAGATGGCAAGGTCACCCTTTCTTCCTTAGCTTCTGCAGTTTCGTCAGGAAAGCTTTCTGGACTAGACTTGCACCAACTGAATATTATTTTGAAGGTTGACCTTCAGGGATCCATTGAAGCCGTCAAACAAGCCCTGCAGGTGCTACCACAAGATAATGTCACACTGAAGTTTTTGATGGAGACAACAGGTGATGTAAGCACAAGTGATGTTGACCTTGCGGCTGCAAGCAAAGCGATTATTTTTGGATTTAATGTCAAAGCACCAGGCTCTGTAAAAAGCTATGCAGATAATAAAGCTGTTGAGATAAGATTATATAGAGTTATTTATGAATTAATTGATGATGTACGAAAAGCAATGGAAGGGCTCCTAGATTCTGTTGAGGAACAAGTACCGATTGGCTCAGCAGAAATACGGGCTGTATTCAGCAGTGGTAGCGGTCGTGCTGCCGGATGTATGGTTACAGAGGGAAAGGTTACAAAAGGCTGTGGCATTCGAGTCATGCGGAAGGGAAAAATAGTTCATGTTGGTATTCTTGATTCTTTGAGACGGGTGAAAGAGATTGTTAAAGAGGTAAATGCCGGTCTTGAGTGTGGACTTGCGTTAGAAGATTATGATGATTGGGAAGAGGGCGACATTCTTGAAGCCTTCAACACAGTTGAGAAGAGAAGAACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAGGGAGTAGGATCTTAA 3066 0.4419 MLILVGNVQGTSMSSLASPISFGSSSRMSHSVVRRVSLSSSRRNCIGKKRWHCVSLSVCRYSVTTTDFVADQGNSVSSLDSSNNDDSNNKGGGDSGGGVGGSFVLKPPPKPVLKSNNDSILGSSSGLGGSTRNSEGDDGVDERSKVIESLGEVLEKAEKLETSKLGGKRSNGSVNEPARPVMNDKPKDDEPVNSLQKHKAKTLKSIWRKGDSVATVQKVVKEVPKPSVKSSEVGESQVGGGEKVMSQSSDPQPLSRPQPMLQSRPSIAPPPPPPVKKPVILKDDKGQGETPPVKSKERKGPILIDKHASKKPAVDPVIARTVLAPTKPGKAPPQGRYKDDYRKKGASSGEGGPRRRMVVNKDGVPDEDTSERNVSIPGTARKGRKWSKASRRAVRLQAARDAAPVKVEILEVSDNGMLVEELAYNLAITEGDILGSLYSKGVKPDGVQTLDKDMVKMICKDYDVEVIDADPYKVEGLVKRREILEEEDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKTKVAASEAGGITQGIGAYKVQVPVDGKTLPCVFLDTPGHEAFGAMRARGASVTDICIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPDRVMQELSSIGLMPEDWGGDIPMVQISALQGQNVDDLLETVMLVAELQELKANPDRSAKGTVIEAGMDKSKGPFATFIVQNGSLRRGDIVVCGGAFGKVRALFDDGGKRVDVATPSIPVQVIGLNNVPVAGDVFEVVESLDTAREKAESRVMSLRDERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVKQALQVLPQDNVTLKFLMETTGDVSTSDVDLAAASKAIIFGFNVKAPGSVKSYADNKAVEIRLYRVIYELIDDVRKAMEGLLDSVEEQVPIGSAEIRAVFSSGSGRAAGCMVTEGKVTKGCGIRVMRKGKIVHVGILDSLRRVKEIVKEVNAGLECGLALEDYDDWEEGDILEAFNTVEKRRTLEEASASMAAAVEGVGS* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2345 1021 MobiDBLite consensus disorder prediction 241 262 - -
Mtr2g2345 1021 PRINTS GTP-binding elongation factor signature 498 511 IPR000795 GO:0003924|GO:0005525
Mtr2g2345 1021 PRINTS GTP-binding elongation factor signature 550 560 IPR000795 GO:0003924|GO:0005525
Mtr2g2345 1021 PRINTS GTP-binding elongation factor signature 566 577 IPR000795 GO:0003924|GO:0005525
Mtr2g2345 1021 PRINTS GTP-binding elongation factor signature 602 611 IPR000795 GO:0003924|GO:0005525
Mtr2g2345 1021 Coils Coil 753 773 - -
Mtr2g2345 1021 CDD IF2_eIF5B 497 663 - -
Mtr2g2345 1021 Gene3D Translation factors 670 786 - -
Mtr2g2345 1021 MobiDBLite consensus disorder prediction 116 132 - -
Mtr2g2345 1021 Gene3D - 491 669 IPR027417 -
Mtr2g2345 1021 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 801 913 IPR036925 -
Mtr2g2345 1021 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 670 IPR027417 -
Mtr2g2345 1021 MobiDBLite consensus disorder prediction 263 277 - -
Mtr2g2345 1021 MobiDBLite consensus disorder prediction 72 91 - -
Mtr2g2345 1021 CDD IF2_mtIF2_II 674 766 IPR044145 -
Mtr2g2345 1021 SUPERFAMILY Translation proteins 670 754 IPR009000 -
Mtr2g2345 1021 MobiDBLite consensus disorder prediction 158 386 - -
Mtr2g2345 1021 MobiDBLite consensus disorder prediction 181 197 - -
Mtr2g2345 1021 Hamap Translation initiation factor IF-2 [infB]. 7 1003 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mtr2g2345 1021 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 36 1013 - -
Mtr2g2345 1021 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 36 1013 IPR015760 -
Mtr2g2345 1021 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 494 667 IPR000795 GO:0003924|GO:0005525
Mtr2g2345 1021 MobiDBLite consensus disorder prediction 72 143 - -
Mtr2g2345 1021 Pfam Elongation factor Tu GTP binding domain 499 659 IPR000795 GO:0003924|GO:0005525
Mtr2g2345 1021 ProSitePatterns Initiation factor 2 signature. 956 978 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mtr2g2345 1021 Gene3D - 802 906 IPR036925 -
Mtr2g2345 1021 MobiDBLite consensus disorder prediction 278 313 - -
Mtr2g2345 1021 Gene3D Translation factors 907 1004 - -
Mtr2g2345 1021 SUPERFAMILY Translation proteins 909 1003 IPR009000 -
Mtr2g2345 1021 TIGRFAM IF-2: translation initiation factor IF-2 415 1005 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mtr2g2345 1021 CDD mtIF2_IVc 913 995 - -
Mtr2g2345 1021 MobiDBLite consensus disorder prediction 333 369 - -
Mtr2g2345 1021 Pfam Translation-initiation factor 2 802 895 IPR023115 -
Mtr2g2345 1021 TIGRFAM small_GTP: small GTP-binding protein domain 496 657 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2345 Mtr-Chr2 35445777 35453537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2345 473 893 Eukaryotic Initiation Factors Gene Family AT1G76810 28.803 1.51e-27 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2345 2 35445777 35453537 Mtr2g2345 2 35445777 35453537 ECH