Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2330 ATGAGCAACATAAGCATGGTTGAGGCAAAGCTACCACCAGGGTTCAGATTTCATCCTAGAGATGAAGAACTTGTGTGTGATTACTTGATGAAGAAGGTGACACATAGTGATTCCTTTCTCATGATTGATGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAAGCAGCATGTGTGGGAGGGAAAGAGTGGTATTTCTACACACAAAGAGATCGTAAATATGCAACAGGACTACGAACAAATCGTGCAACTGCATCAGGTTATTGGAAAGCAACAGGAAAGGACAGAGCTATCCTTCGTAAGGGCACTCTTGTTGGAATGAGAAAGACTTTAGTGTTCTATCAAGGAAGGGCACCTAAAGGGAGAAAAACTGAATGGGTTATGCATGAGTTTCGTATTGAGGGTCCTCATGGCCCTCCTAAAATTTCATCTTCTAAGGAAGATTGGGTTTTGTGTAGGGTGTTCTACAAAAACAGAGAAGTTGCTACAAAACCTCCAAGCATGGGTAGTTGCTATGATGACACAGGCTCTTCATCACTTCCAGCATTAATGGATTCTTACATAAGTTTTGACCAAGCTCAATTCCATACAGATGAATATGAGCAAGTGCCCTGCTTCTCCATGTTTTCTCAAAACCAAACCAACCCAATCTACAACAATATAACAACCAATATGGAACCAAAATTACCTCTAGCCAACAATAACAATGCAAGTACATTTGGAGGAGCACCTTATAGCTTAGACCCTTTATCATGTGATAGAAAAGTGTTAAAAGCTGTTTTGAGTCAACTATCAAAGATGGAAAGAAACCCTATTAATGATCAAAACCTAAAAGGGTCATCACCAAGCTTAGGTGAAGGAAGTTCTGAGAGTTACTTATCTGAAGTGGGTATGCCCCACATGTGGAACAATTTCTAA 921 0.4028 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSFLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRAILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKISSSKEDWVLCRVFYKNREVATKPPSMGSCYDDTGSSSLPALMDSYISFDQAQFHTDEYEQVPCFSMFSQNQTNPIYNNITTNMEPKLPLANNNNASTFGGAPYSLDPLSCDRKVLKAVLSQLSKMERNPINDQNLKGSSPSLGEGSSESYLSEVGMPHMWNNF* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2330 306 MobiDBLite consensus disorder prediction 271 292 - -
Mtr2g2330 306 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Mtr2g2330 306 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Mtr2g2330 306 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 303 - -
Mtr2g2330 306 PANTHER BNAC05G40360D PROTEIN 3 303 - -
Mtr2g2330 306 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
Mtr2g2330 306 MobiDBLite consensus disorder prediction 271 291 - -
Mtr2g2330 306 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2330 Mtr-Chr2 35224346 35229822 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2330 2 304 NAC Transcription Factor Family AT1G56010 60.748 1.52e-130 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g2330 NAM 2.1e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2330 2 35224346 35229822 Mtr2g2330 2 35224346 35229822 ECH