Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2317 ATGGCGAAACCTGGTCGAGCTCGTCGCTCACCACCATCAGGTTCCGTCTCCGGATCTTCTTCTCTCTCCTCCTCTTCCCGTTCCTCTTCTCGCTCCCGCTCCCGTTCCAGATCCTTCTCTTCCTCTTCTCGCTCTCCCTCCCGCAGTTCCAAGAGCCGTAGCCGTAGTCCTCCTCCTCCAAGACGCAAAAGTTCTGCTGAACCAGCTAGGCGAGGTCGATCTCCTCCTCTTCCTCCACCTCCACAGTCTAAGAGACCTTCTCCTCCTCCAAGGAAACCTTCTCCTGTACGTGAGTCTCTTGTTCTCCACGTTGAGAAACTCAGCAGGAATGTCAATGAAGGCCATTTGAAAGAAATTTTCAGTAATTTTGGCGAGGTTGTAAGTGTGGAGTTGGTGATGGATAGAGCTGTTAATCTTCCAAAAGGATATGGATATGTGCATTTCAAGACAAGAGGGGAAGCTGAAAAAGCATTATTGTACATGGATGGTGCCCAAATAGATGGCAATGTTGTTAAGGCAAGATTTACTCTACCTCCAAGACAGAAAGCTTCACCACCCCCAAAAGCTGTTGCTCCAAAGAGAGATGCACCCAGGACTGATAATGCTGGTGCAGAAGTTGAAAAAGATGGGCCAAAGCGTCCAAGAGAATCTTCTCCTCGGAGAAAACCTCCTCCCTCACCACGAAGAAGATCTCCTGTGCCTCGAAGAGCTGGATCTCCAAGACGACCAGAATCTCCTCGCCGCCGTGCAGATTCTCCTGTTCGTCGTCGATTAGACTCTCCTTATCGTCGCGGAGCTGGAGACACACCTCCTAGGAGGAGACCTGTGTCTCCCGGAAGAGGTCGTTCTCCATCTCCACCACCAAGGCGCCTTAGATCCCCTGCAAGGGTATCACCTCGAAGGATGCGTGGAAGCCCAGGCCCAGGTCGGAGACGTTCTCCTCCTCCACCTCCAAGACGCCGTTCACCTCCTAGACGAGCCCGTAGTCCTCCTAGAAGATCTCCAGTTGGTCGTAGGCGTAGTCGCTCTCCAATACGTAGATCTGCACGCTCACGCTCAAGATCATTCTCACCTCGCAGAGGCAGGCCACCTATGAGACGGGGAAGGTCATCATCTTACTCTGATTCGCCAAGTCCTCGCAAGGTATCCCGGAGATCAAAGAGTCGCAGTCCAAGAAGGCCTTTGAAAGGACGAGCCAGTAGCAACAGTAGCAGCAGCAGTTCACCACCCCCAGCTCGCAAACCATAG 1248 0.5272 MAKPGRARRSPPSGSVSGSSSLSSSSRSSSRSRSRSRSFSSSSRSPSRSSKSRSRSPPPPRRKSSAEPARRGRSPPLPPPPQSKRPSPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSVELVMDRAVNLPKGYGYVHFKTRGEAEKALLYMDGAQIDGNVVKARFTLPPRQKASPPPKAVAPKRDAPRTDNAGAEVEKDGPKRPRESSPRRKPPPSPRRRSPVPRRAGSPRRPESPRRRADSPVRRRLDSPYRRGAGDTPPRRRPVSPGRGRSPSPPPRRLRSPARVSPRRMRGSPGPGRRRSPPPPPRRRSPPRRARSPPRRSPVGRRRSRSPIRRSARSRSRSFSPRRGRPPMRRGRSSSYSDSPSPRKVSRRSKSRSPRRPLKGRASSNSSSSSSPPPARKP* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2317 415 MobiDBLite consensus disorder prediction 1 99 - -
Mtr2g2317 415 CDD RRM_RNPS1 102 174 IPR034201 -
Mtr2g2317 415 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 100 178 IPR000504 GO:0003723
Mtr2g2317 415 MobiDBLite consensus disorder prediction 240 270 - -
Mtr2g2317 415 SUPERFAMILY RNA-binding domain, RBD 85 185 IPR035979 GO:0003676
Mtr2g2317 415 MobiDBLite consensus disorder prediction 193 223 - -
Mtr2g2317 415 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 104 172 IPR000504 GO:0003723
Mtr2g2317 415 MobiDBLite consensus disorder prediction 12 54 - -
Mtr2g2317 415 MobiDBLite consensus disorder prediction 314 366 - -
Mtr2g2317 415 MobiDBLite consensus disorder prediction 395 415 - -
Mtr2g2317 415 MobiDBLite consensus disorder prediction 176 415 - -
Mtr2g2317 415 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 1 396 - -
Mtr2g2317 415 MobiDBLite consensus disorder prediction 72 95 - -
Mtr2g2317 415 Gene3D - 16 185 IPR012677 -
Mtr2g2317 415 PANTHER BNAA09G56240D PROTEIN 1 396 - -
Mtr2g2317 415 SMART rrm1_1 101 174 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2317 Mtr-Chr2 34989931 34995993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2317 102 175 Eukaryotic Initiation Factors Gene Family AT2G23350 32.432 3.00e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2317 2 34989931 34995993 Mtr2g2317 2 34989931 34995993 ECH