Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2312 ATGGCTGTTGAGGCTCACCATCTTCACCTCTTTTCCCCTCAACTCATTACTAACCGAGAAATGATGAACCCGGTTGAAACAAACACAAACATCATCTACAACAATATATCACAAATGGGTTATTCTTCAATTCCACCATCTACCATCAAAACCACCGCAACAGAGACTATGATTCTTCCACCTTACAACTCAATAACAACCGATTCATTACCTCAGAAAACTGCTATGAACTCTGATAGTGGTCTCACCTATAATGTTCCTCCATTAAGAAAACGTTCTAGAGATTCTAGAGACTATTCTAATTCCATCAATTTTCCTTACCCAAATTCCTATATTTCTCCTTCAACACCACAACAACAAAACAATCATAGAAGTTGTGCTTCTTCTTCTTTCTCTTTTCTTGGTGAAGATATTTCTCTTCAGATCCAAAGACAACAACTTGATATTGATCAACTCATTTCTCAACAAATGGAGAAAGTGAAATATGAGATTGAAGAAAAGCGTAAGAGACAAGCGATGAGATTGATTCAAGCAATTGATATGAGTGTGACAAAGAGAATGAAGGCTAAAGAAGAAGAAATAGAGAAAATTGGGAAAATGAACTGGGCATTAGAAGAAAGAGTTAAGTCACTTTGCATGGAGAATCAAATTTGGCGTGATTTGGCACAAAGCAATGAAGCAACAGCCAATGCTTTGAGGACTAATCTTGAACAACTTCTTCAACAACGCGCCCCGGCCGGTGACGGTAATGAAGATACCGTTGTTCCGGCCAGGCCGGTTGCTTTGATGGATGATGCAGAATCATGTTGTGATAGTAATGAGAGTATCAATGATGATGATGCAGTTGATCAGTGGAGAAATGTGGTGGGGCATAATGGTAAAAACATTGGAGCAATGAAGATGGTGGGAAATTGTGGTGGTGGTGATAGCAATTTTGTGAATAGCATGAAACTGTGCAGTAACTGTGGGAAAGATGAATCATGTGTGTTGATTTTACCTTGTAGACATCTTTGTTTATGTGCTGTTTGTGGGTCTTCTCTTCACATTTGTCCTATTTGTAAATCTTTCAAAACTGCTAGTATCCATGTTAACATGTCATGA 1101 0.3842 MAVEAHHLHLFSPQLITNREMMNPVETNTNIIYNNISQMGYSSIPPSTIKTTATETMILPPYNSITTDSLPQKTAMNSDSGLTYNVPPLRKRSRDSRDYSNSINFPYPNSYISPSTPQQQNNHRSCASSSFSFLGEDISLQIQRQQLDIDQLISQQMEKVKYEIEEKRKRQAMRLIQAIDMSVTKRMKAKEEEIEKIGKMNWALEERVKSLCMENQIWRDLAQSNEATANALRTNLEQLLQQRAPAGDGNEDTVVPARPVALMDDAESCCDSNESINDDDAVDQWRNVVGHNGKNIGAMKMVGNCGGGDSNFVNSMKLCSNCGKDESCVLILPCRHLCLCAVCGSSLHICPICKSFKTASIHVNMS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2312 366 Pfam Zinc finger, C3HC4 type (RING finger) 317 355 - -
Mtr2g2312 366 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 365 IPR017066 -
Mtr2g2312 366 PIRSF SBP1_RNase_bind 1 366 IPR017066 -
Mtr2g2312 366 Coils Coil 222 242 - -
Mtr2g2312 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 309 366 IPR013083 -
Mtr2g2312 366 ProSiteProfiles Zinc finger RING-type profile. 319 354 IPR001841 -
Mtr2g2312 366 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 365 - -
Mtr2g2312 366 MobiDBLite consensus disorder prediction 64 84 - -
Mtr2g2312 366 MobiDBLite consensus disorder prediction 64 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2312 Mtr-Chr2 34913425 34915010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2312 308 355 Miscellaneous Gene Families AT4G39050 37.500 5.56e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2312 2 34913425 34915010 Mtr2g2312 2 34913425 34915010 ECH