Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2293 ATGGGTATGAACGAGGATTTCAACATGGATAATGAATATGTTGTAGATGATGATGATGTTCCACTTCCTGGATTTAGATTCCATCCCACTGATGAAGAACTTGTTACTTTTTATCTTAGAAGAAAACTTGACAAGAAACCTATTGCTATTGATCTTATCAAGCAAATTGATATCTACAAATATGATCCTTGGGATCTTCCAAAAGTAAATATACCAGGAGCAGAGAAGGAAGGTTACTTTTTTTGCCAAAGAGGAAGAAAATATAGGAACAGCGTTAGACCAAATAGAGTGACTGGCTCTGGATTCTGGAAAGCAACTGGAATAGACAAAGCAATATACTCAAATGGAGCAGAAGGAAATGATTGTGTTGGACTCAAAAAAACACTTGTTTACTATCGCGGTAGTGCCGGAAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCATCAAACATTGATGCCAAAACAAACATTTCCTATCCTAGGAATGATGCTGATTATGCTCATGAAGCTGAAATTTGGACATTGTGTAGAATTCTAAAAAGAAATGTATCACAAAGGAAACAAATACCAGAGATGAAACAATTAGCCAACAAACTTCAATCCGTTCATAACACGAGCACCAGAATGGACAACAATATGGAGTTCAACATAAATCAACAAACATATATCAATTTCGGTGCAAGCCATGAACATCATCACGTTCATGAGGACAAACCAGTCAATAACTATACAAGCAGTGACCAAAGCAATCAGTTTCATGGAAGCAATCAGTTTCATGAGGATGCTAATGAGTTGTTACCATTTGATAATTGGGATGAGCTTGGATCAGTTGTGAGGTTTGCTGTTGATTCACCTAGTTTGTAA 876 0.3687 MGMNEDFNMDNEYVVDDDDVPLPGFRFHPTDEELVTFYLRRKLDKKPIAIDLIKQIDIYKYDPWDLPKVNIPGAEKEGYFFCQRGRKYRNSVRPNRVTGSGFWKATGIDKAIYSNGAEGNDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNIDAKTNISYPRNDADYAHEAEIWTLCRILKRNVSQRKQIPEMKQLANKLQSVHNTSTRMDNNMEFNINQQTYINFGASHEHHHVHEDKPVNNYTSSDQSNQFHGSNQFHEDANELLPFDNWDELGSVVRFAVDSPSL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2293 291 Gene3D NAC domain 30 189 IPR036093 GO:0003677|GO:0006355
Mtr2g2293 291 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 15 262 - -
Mtr2g2293 291 MobiDBLite consensus disorder prediction 234 259 - -
Mtr2g2293 291 ProSiteProfiles NAC domain profile. 21 185 IPR003441 GO:0003677|GO:0006355
Mtr2g2293 291 Pfam No apical meristem (NAM) protein 23 151 IPR003441 GO:0003677|GO:0006355
Mtr2g2293 291 SUPERFAMILY NAC domain 18 184 IPR036093 GO:0003677|GO:0006355
Mtr2g2293 291 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 262 - -
Mtr2g2293 291 MobiDBLite consensus disorder prediction 245 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2293 Mtr-Chr2 34706764 34708992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2293 18 213 NAC Transcription Factor Family AT5G39820 54.930 2.49e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g2293 NAM 2.2e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2293 2 34706764 34708992 Mtr2g2293 2 34706764 34708992 ECH