Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2289 ATGAAGGATGGTGGTAGAAAACAAGGTACAATGTCACCATGTGCAGCATGCAAGCTTCTTAGAAGGAGATGTGCTAAAGATTGTGTGTTTGCTCCATATTTTCCAGCTGATGAACCTCACAAATTTGGCAGCGTCCACAAGGTTTTTGGAGCTAGCAATGTCAACAAAATGTTACAGGAATTACCAGAACATCAACGAAGTGATGCAGTTAGTTCAATGGTATATGAAGCAAATGCAAGAGTAAGGGATCCTGTGTATGGATGTGTGGGAGCCATATCCTCTCTGCAGCAACAAGTAGATGAGCTACAAACCCAATTAGCACAAGCACAAGCAGAGGTTGTGCATATGAAGATGCACCAATTCTCATCTGATCATCATCAACCACCATCGAATTCGTCACCACCATCAGAAAATGTGTACCAATCAAGCAGGTTCTTTTCTTCACCAAACAAAATGGGACAATCCTTGTGGTCTTACTAG 480 0.4208 MKDGGRKQGTMSPCAACKLLRRRCAKDCVFAPYFPADEPHKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDELQTQLAQAQAEVVHMKMHQFSSDHHQPPSNSSPPSENVYQSSRFFSSPNKMGQSLWSY* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2289 159 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Mtr2g2289 159 MobiDBLite consensus disorder prediction 123 159 - -
Mtr2g2289 159 Coils Coil 92 119 - -
Mtr2g2289 159 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 139 - -
Mtr2g2289 159 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 139 - -
Mtr2g2289 159 MobiDBLite consensus disorder prediction 118 159 - -
Mtr2g2289 159 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2289 Mtr-Chr2 34631915 34637102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2289 1 120 AS2 family AT1G31320 82.500 3.81e-65 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mtr2g2289 LOB 1.6e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2289 2 34631915 34637102 Mtr2g2289 2 34631915 34637102 ECH