Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2288 ATGTCCCTATCACCTTCATTCATGGCTTCTTCAACAATCCCTCATCACTTCTATTCAAACTATACTTCTGATTTCACCACACAACAAGGGTTTTCTTCATCAATTATGGACAATACTATGATGTGGGGTTGTCAAGAAAATATAATGCCTGTTTATGAAAATTATGGAGCATTTGATCAAATTGTGTCACTTGATTGTGATGCTTCAGCTTCTTGGATTCCAAATTTGGTTGATCAACAAGATTTCGCTGTTCCGGCTTTATTATCAGATTGTAAAATGGGATTTTATGGTGGAGGGTTTCAGAATTTCAATGGTAGATATAATAATAATCAGCCACATATTATTGGTCATGAGTTTGTAGAAGATCAATGTTGTGGTTTGGTTGAAGATGTTAAACCACCTACAACTTATCCTAATGTTGCAAGAGAAAATTGGGGAATTCAAGGTAATCAACTAGCAGCAGTTGAAGAACCAAACATAAAGGTAGGAAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTTCGATATTTGAAGAAAAGAAATCAAAGAAACTTCAACAAAACCATCAAGTATGCATGTCGAAAAACTTTAGCTGATAGAAGAGTAAGAGTGAGGGGAAGGTTTGCAAGAAACAATGAGACATGTGAAGAAGATCACATGGCCACAAAAAAGCTTGAGAATCATCATGATCACATTAATGAAGATTTTTATGGTGCTGATTCATTCCAGTTTCAGTTAAAGAATGAGGAAGAGGACTGGCTTCAAGAGGCCATGGCAAGTTTGGTCTATTTATCTCATTCATCACCAGAAGATATGTGA 822 0.3577 MSLSPSFMASSTIPHHFYSNYTSDFTTQQGFSSSIMDNTMMWGCQENIMPVYENYGAFDQIVSLDCDASASWIPNLVDQQDFAVPALLSDCKMGFYGGGFQNFNGRYNNNQPHIIGHEFVEDQCCGLVEDVKPPTTYPNVARENWGIQGNQLAAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNETCEEDHMATKKLENHHDHINEDFYGADSFQFQLKNEEEDWLQEAMASLVYLSHSSPEDM* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2288 273 ProSiteProfiles CCT domain profile. 170 212 IPR010402 GO:0005515
Mtr2g2288 273 PANTHER ACTIVATOR OF SPOMIN::LUC2 6 268 - -
Mtr2g2288 273 Pfam CCT motif 170 212 IPR010402 GO:0005515
Mtr2g2288 273 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2288 Mtr-Chr2 34611134 34613346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2288 54 221 C2C2-CO-like Transcription Factor Family AT5G24930 29.885 4.02e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr2g2288 CCT 8.4e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2288 2 34611134 34613346 Mtr2g2288 2 34611134 34613346 ECH