Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2150 ATGATGCAAGGAAGTGGAGAATTAACAGTTCCTCCAGGGTTTAGGTTCCACCCAACTGATGAGGAGCTTCTTTACTATTACTTGAGGAAGAAAGTTTCTTATGAAGCCATCGATCTTGATGTTATCAGAGAAGTTGATCTCAACAGACTTGAGCCTTGGGATCTCAAAGATAAGTGTAGGATTGGATCAGGGCCACAAAATGAGTGGTATTTCTTCAGTCACAAGGACAAGAAATACCCAACAGGAACAAGAACAAATAGAGCAACTACAGCTGGGTTTTGGAAAGCAACAGGAAGAGACAAAGCCATATATCACACCAATTCCAAAAGGATTGGAATGAGGAAAACCTTAGTGTTCTACACTGGACGTGCTCCTCATGGTCACAAAACTGATTGGATCATGCATGAGTATCGTCTTGATGATGATGATAATGCAGAAGTTCAGGAAGATGGATGGGTAGTTTGCAGGGTATTCAAAAAGAAAAACACAAACAGAAGCTACCAACAAGAAATTGAAGAAGAAGATCATCACATGATTAACCACATGAGATCAACAAATGGTCCAAATCATTTTCTAGAACCAAAACATCATCATCACATGCAACAACTAGGACTATATGATTACAACAATAACACCACCACCACCTTTGATGGTACAATTCATCTACCACAATTGTTCAGTCCAGAATCAGCCATAGCAGCACCACCTACTTCCTTCCATAATTCATCAATGGACATCCTTGAATGCTCTCAAAATTTGTTGAGGCTCACAACAACAAATACTAGCTCTGGACTTAATCTCATGCAACAACAACAACAACAAGGAGAAAGGTTGATCAGTGGTAGTGATTGGTCATTCTTGGATAAACTACTTGCATCACACAATGGAATGGATCTTAATCTAAGGAACAAATTATGTAACACTCCTAATAATCACCAGGCTGCACCTTCTGCTGTTGGAACTTCTTCTGCTCAGAAATTTCCATTTCATTACCTTGGTTGTGAGTCTCATGATATTATGAAATTTTCAAAGTAA 1035 0.3894 MMQGSGELTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNRLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGHKTDWIMHEYRLDDDDNAEVQEDGWVVCRVFKKKNTNRSYQQEIEEEDHHMINHMRSTNGPNHFLEPKHHHHMQQLGLYDYNNNTTTTFDGTIHLPQLFSPESAIAAPPTSFHNSSMDILECSQNLLRLTTTNTSSGLNLMQQQQQQGERLISGSDWSFLDKLLASHNGMDLNLRNKLCNTPNNHQAAPSAVGTSSAQKFPFHYLGCESHDIMKFSK* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2150 344 PANTHER PROTEIN SOMBRERO 6 315 - -
Mtr2g2150 344 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Mtr2g2150 344 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Mtr2g2150 344 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Mtr2g2150 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 315 - -
Mtr2g2150 344 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2150 Mtr-Chr2 32088147 32091757 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr2g2150 NAM 7.4e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2150 2 32088147 32091757 Mtr2g2150 2 32088147 32091757 ECH