Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2070 ATGCAAGAAATTTATTCCATGGCAGATGGAAATCTTTTCTGCATTGAGGAAGATAGAAGGATGAAAACCTACCATAACCAGAATAATCATCATCATCATCATCTTGCTTTGAAATGTCCTCGTTGTAATTCCTTCAACACGAAATTCTGCTACTACAACAACTACAACCTCTCTCAGCCTCGTCATTTCTGTAAAAACTGCCGTCGCTACTGGACCAAAGGTGGCATCCTTCGTAACGTCCCCGTCGGCGGTGGTTCCCAGAAATCAAAGAAATCAAAGACGGCATCATCATCTTCCATCCCCTCTTCAGCAGCAACCACGCCAACACCGCTTCAACCGGAAGCTGATAAGTCAGATTCTCACTCCAACAGTGATGGCTCAACCATTAGGGTTAACTCTGTTATAGAAAATGAACAAGTTAATAGCTTCAGGAACCTCATAATATCAAGTTCAACCAATGATCAAGTACATGTGGTACAGCATGGAGACTCGGTGATGCTCAACCATCAGCAGTTCTCAAATGAATTTGGATCGTTGGATTGGGAAGGTGGTGCTAACACCGTTGATCAGTCTTACTGGACACAGTCTCATTGGTCTGATCATGTGATTCATTCATCCTCTCTTTTTCATCTTCCATGA 639 0.4288 MQEIYSMADGNLFCIEEDRRMKTYHNQNNHHHHHLALKCPRCNSFNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGILRNVPVGGGSQKSKKSKTASSSSIPSSAATTPTPLQPEADKSDSHSNSDGSTIRVNSVIENEQVNSFRNLIISSSTNDQVHVVQHGDSVMLNHQQFSNEFGSLDWEGGANTVDQSYWTQSHWSDHVIHSSSLFHLP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2070 212 Pfam Dof domain, zinc finger 37 91 IPR003851 GO:0003677|GO:0006355
Mtr2g2070 212 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Mtr2g2070 212 MobiDBLite consensus disorder prediction 81 127 - -
Mtr2g2070 212 MobiDBLite consensus disorder prediction 85 117 - -
Mtr2g2070 212 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Mtr2g2070 212 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 171 IPR045174 GO:0003700|GO:0006355
Mtr2g2070 212 PANTHER DOF ZINC FINGER PROTEIN 4 24 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2070 Mtr-Chr2 30608316 30609333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2070 18 112 C2C2-Dof Transcription Factor Family AT5G60850 71.579 2.10e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr2g2070 zf-Dof 8.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2070 - - mtr:MTR_2g059540 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4001 4 53791595 53793128 Mtr2g2070 2 30608316 30609333 PCT