Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0489 ATGGCTGAAGTGAGAAAAGGTGAAGAAAATCAAGGGATTAAGCTATTTGGCACAACAATAAAATTGCATGGTGAAGAATTAAAAGAAGGTGAAAAAGAAAGTGAAGATCAAACGGTGGAGAAGAAGATAGAAAAGATCATACCATGTCCAAGATGCAAGAGTATGGAAACTAAATTTTGTTATTTCAATAATTACAACGTTAATCAACCAAGACATTTTTGTAAGAGTTGTCAAAGGTACTGGACGGCTGGTGGGGCCCTGCGTAACGTTCCGGTTGGAGCTGGTCGTCGGAAGGCCAAGCCACCCGGTCACGAGGATAGTGGTTCACCGGAAAGTTGTCTCTACGAAGCTGCTAGTTCTGATGATGGCCATAACTACTTAGGGTTAGAACAATTTATGCCTCCTCAGAGTGATTTTCGGGAAGTATTTTCCGGCAAACGGCGGAGGAAGACCTCAGGTGGTTATTCATTAGCATCCTCCTTGTGA 486 0.428 MAEVRKGEENQGIKLFGTTIKLHGEELKEGEKESEDQTVEKKIEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVPVGAGRRKAKPPGHEDSGSPESCLYEAASSDDGHNYLGLEQFMPPQSDFREVFSGKRRRKTSGGYSLASSL* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0489 161 MobiDBLite consensus disorder prediction 92 114 - -
Mtr2g0489 161 PANTHER CYCLIC DOF FACTOR 2 5 154 IPR045174 GO:0003700|GO:0006355
Mtr2g0489 161 Pfam Dof domain, zinc finger 45 100 IPR003851 GO:0003677|GO:0006355
Mtr2g0489 161 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Mtr2g0489 161 MobiDBLite consensus disorder prediction 139 161 - -
Mtr2g0489 161 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Mtr2g0489 161 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 5 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0489 Mtr-Chr2 4840729 4841538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0489 8 103 C2C2-Dof Transcription Factor Family AT1G29160 63.478 2.76e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr2g0489 zf-Dof 2.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0489 - - tcc:18596691 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0489 2 4840729 4841538 Mtr2g0489 2 4840729 4841538 ECH