Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0391 ATGGAGCAAGAAAGTGGAGATGGTGGAAGAAGAGGTGAGATGAGTAAGCTTGTTCAAGCTCATCCTCAACCTCAGAAGTGTCCTAGGTGTGATTCATTCAACACCAAGTTCTGCTATTACAACAACTATAGCCTATCTCAGCCTCGTTTCTTCTGCAAAACATGCAGAAGGTACTGGACTCAAGGTGGAACATTGAGAAATGTTCCTATTGGTGGTGGTTGTCGTAAGGGAAAGAAATCCAAAACTCCATCATCCTCAACACCATCAAGTAATTCTTCTCTGTCTCAGCCAACACTGCCACAATCAACCGATCAGTTGACCATGGCTGCTATGGCTAAAAACTCTTCTTCTGTTTTTGCTTCATTTTCCTCTGCTGCTTCTTTTTATCAAGGAGGTGTTGTTGGTTACATGTCGCCTTTTGCTGCATTTAATCATTCTTTAAATTCAAATCCATCAGCACACTCTGCATCACACACTTTTGAACAGTCTCAGAATCTTGGTGTTGGAGTTGGTCTTGGTCTTGGTTCTTCTTCAAATTTGAGCCTTTTACAAGGTTTCAATGTTGCTGCTGCTGCTCTTGTAAGCTCATCACAAGGACAAAATCGTCCACCTCCGCAACAATTCTTTCAACTAGGTGGTAATGGATCAGGACCAATGTTTACCTCTCAACCACGAGGTTTGAATTTGATTCCTCCATCTACCATGGTTAATGCTACTACTTCTGTTGCTACTGTTTCTACTGCTTATAATGAAAATTGGCCTCAAAGCTTCATCAATAGTGGTAACAACAGAGCCTCTGATCAATCTTTATGGAGTACTATCAGCACCACTTCAATTAATGGTGTTGGTGCTGGTGCTGGTGGTAGCCGTGGTGATGTTGGTGTTGGTGGTAGCCGTGGTGCTGGTGCTGGTGCTGGTGGTAATGGTAGTGTTGGTGCTGGGGCTAGTGGATCTGCTTCTTTGGCTCTAAATCAATGGCATGATCTGTCAGAGTTCAATCCTCCTCAGTGA 1011 0.4342 MEQESGDGGRRGEMSKLVQAHPQPQKCPRCDSFNTKFCYYNNYSLSQPRFFCKTCRRYWTQGGTLRNVPIGGGCRKGKKSKTPSSSTPSSNSSLSQPTLPQSTDQLTMAAMAKNSSSVFASFSSAASFYQGGVVGYMSPFAAFNHSLNSNPSAHSASHTFEQSQNLGVGVGLGLGSSSNLSLLQGFNVAAAALVSSSQGQNRPPPQQFFQLGGNGSGPMFTSQPRGLNLIPPSTMVNATTSVATVSTAYNENWPQSFINSGNNRASDQSLWSTISTTSINGVGAGAGGSRGDVGVGGSRGAGAGAGGNGSVGAGASGSASLALNQWHDLSEFNPPQ* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0391 336 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 14 284 - -
Mtr2g0391 336 Pfam Dof domain, zinc finger 24 79 IPR003851 GO:0003677|GO:0006355
Mtr2g0391 336 MobiDBLite consensus disorder prediction 1 25 - -
Mtr2g0391 336 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
Mtr2g0391 336 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Mtr2g0391 336 MobiDBLite consensus disorder prediction 79 100 - -
Mtr2g0391 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 284 IPR045174 GO:0003700|GO:0006355
Mtr2g0391 336 MobiDBLite consensus disorder prediction 70 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0391 Mtr-Chr2 3926694 3927809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0391 18 106 C2C2-Dof Transcription Factor Family AT5G60850 64.045 5.48e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr2g0391 zf-Dof 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0391 - - mtr:MTR_2g014060 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0391 2 3926694 3927809 Mtr2g0391 2 3926694 3927809 ECH
Mtr4g2942 4 43144425 43146592 Mtr2g0391 2 3926694 3927809 PCT