Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0363 ATGGGTTTGAGTTCTAAGCAAGTTTCTAGTAGAGGTGTTGATTGGAACCAAACATTGTTGCAAGATCAAAACTTGGAACTTCCAAAGACTCTTCCCATGAGGAAACAACAGCAACAAAATCACCAACTAGAGGCAGTGAATTGTCCAAGATGTGACTCTACAAATACCAAATTTTGTTACTACAACAACTATAACAAGTCTCAACCTCGCCATTTCTGCAGGGCTTGTAAGAGACATTGGACTAAAGGTGGTACTCTAAGGAATGTTCCTGTTGGTGGTGTTAGGAAGAATAAGAGAGTCAAGATATCAACCTCTATTAGCACCACCTCAAAAACTACTATTAGCACCTCCTTCACCACCACCTCAAATGCCAATAGGCTGAATAAAAAAAACACACCTTCTTCTATGCATGAATCTCTTATTCATCCACCATCTTTTTTGCCACCACAGAATCTAATCAGTACCAAAGATCAATCAGAAGGTAATAATGAAGAGTTTGGTATTGGTAATGGCATGTTTCTGAGTTCATCTATGCCCTTTCATCAAAACCAAAGCTTTATATTCCCATTCTCAAACTCAAGCACTTTAAGGTCAAATAATGGATATAACTATGGTGATGAAGAGTTTAAAATAATGGAGGAGTCAACTATTAACAACAGTGCAATGCCAAGCACTAGTGGTAGTGGCACTATTACACAGCCATGGGAGATACCTGCAACAAGTAGTGGAATGGATATGTCAAACTATTGGAGTTGGGAGGATATTGATTCTTTGGTCTCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATCAAACCTTAA 825 0.383 MGLSSKQVSSRGVDWNQTLLQDQNLELPKTLPMRKQQQQNHQLEAVNCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGVRKNKRVKISTSISTTSKTTISTSFTTTSNANRLNKKNTPSSMHESLIHPPSFLPPQNLISTKDQSEGNNEEFGIGNGMFLSSSMPFHQNQSFIFPFSNSSTLRSNNGYNYGDEEFKIMEESTINNSAMPSTSGSGTITQPWEIPATSSGMDMSNYWSWEDIDSLVSTDLNVPWDDSDIKP* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0363 274 PANTHER OS06G0284500 PROTEIN 17 218 - -
Mtr2g0363 274 MobiDBLite consensus disorder prediction 117 139 - -
Mtr2g0363 274 Pfam Dof domain, zinc finger 45 98 IPR003851 GO:0003677|GO:0006355
Mtr2g0363 274 MobiDBLite consensus disorder prediction 117 150 - -
Mtr2g0363 274 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Mtr2g0363 274 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Mtr2g0363 274 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 218 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0363 Mtr-Chr2 3597508 3599105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0363 42 110 C2C2-Dof Transcription Factor Family AT5G66940 64.789 2.72e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mtr2g0363 zf-Dof 2.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0363 - - gmx:778119 354.755