Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4253 ATGACAAGCCATGGCTCATCGTTTTCGAGCCTCCCAAACTATCTCCAAGCCGTCGCTAAAACTCCCTCTCGCTTTGCTCGTCGCGGCTTCTCCGTCTCCACTTCTTACGAAGAAATGAGCCGTGTTCGAGCTAGGTCCGGCAACAGCATGCGCAAAAGCCTCCGTTGGTTTGACTTAGTCAGCTTTGGTATCGGTGGAATGGTCGGCGCCGGAGTCTTCGTCACCACTGGCCACGCTACCCGTGTTCACGCTGGCCCTTCCGTTGTTCTATCTTACGCCATTGCCGGTTTCTGTGCTCTCCTCTCTGCCTTTTGTTACACTGAGTTTGCGGTTGATATGCCGGTCGCCGGTGGCGCTTTTAGCTACCTCCGTGTCACATTCGGTGAATTTGCGGCCTTTATAACCGGTGCAAATCTCATCATGGATTACGTGATGTCAAATGCTGCAGTTGCTAGAGGTTTCACCAAGTACGTCGGCACCACAGTCGGTGTCTCTTCTGCTAAATGGAGGATCACCGTTCCTTCTTTTCCGGAAGGGTTTAACCAAATCGACTTGGTTGCTGTCGTTGTTGTTTTACTCATCACAGTGGTTATCTGCTACAGTACGAAGGAAAGTTCGGTGGTGAATATGATATTGACGGGGTTGCACATACTGTTCATAGCATTTGTGATAGTGATAGGTTTTTGGAAAGGGAGTTGGAAGAATTTAACGCAACCAGCAAACCCGGAGAATCCATCCGGTTTTTTTCCACACGGGGCTGCTGGTGTGTTTAAAGGTGCATCAGCTGTTTATTTAAGCTACATTGGTTATGATGCTGTTTCAACAATGGCGGAAGAGGTTAAGGAGCCTGTGAAAGATATTCCTATAGGTGTTTCTGGATCTGTTATTATTGTCACTATTCTATATTGTCTTATGGCAGCTTCAATGTGCATGCTTCTTCCTTACGATATGATCGATCCTGAAGCACCGTTTTCAGCAGCTTTTAAATCCGACGGATGGGGATGGGCGTCAAGAGTGATAGGAGTGGGGGCCAGTTTTGGAATATTGACATCATTGATAGTTGCTATGTTGGGTCAGGCTCGTTATATGTGTGTCATTGGACGTTCTAATGTGGTCCCTGCTTGGTTTGCTAAGGTCCACCCAAAGACATCCACTCCTGTCAACGCCTCTGCTTTTCTTGGGATCTTCACAGCAGCAATTGCACTTTTTACTGATCTTGATGTTCTCCTCGATCTTGTGTCAATTGGCACACTCTTTGTATTTTACATGGTGGCAAATGCTGTGGTCTATAGACGTTATGTGGTGGCAGGGACAACAAATCCATGGCCAACAGTGTCTTTTCTCCTCTCATTTTCCTTCACTTCCATCATGTTCACCCTTATTTGGAAATGTGTACCAACAGGAGTAGCAAAAGCAGGGATGTTAAGTGCCTGTGGTGTACTTGCTGTAGTAATATTGCAACTTTTTCATTTCACTGTCCCTCAAGCTAGGAAGCCAGAATTTTGGGGTGTACCACTTATGCCATGGATACCAGCAATTTCAATCTTTTTGAATTTGTTTTTGCTGGGATCACTTGATGGGCCATCCTATGTTAGATTTGGAGTCTTTTCTGCTGTTGCAGTGCTATTCTATATTTTCTACAGTGTTCATGCCAGCTTTGATGCTGAAGGAGATGGTTCTCTTGGTCAAAAGAATGGTGAAATCAATGTGGAGTCAAAAGAAAGTGTGGACCAAAGTTTCAAAGTGTAG 1749 0.4563 MTSHGSSFSSLPNYLQAVAKTPSRFARRGFSVSTSYEEMSRVRARSGNSMRKSLRWFDLVSFGIGGMVGAGVFVTTGHATRVHAGPSVVLSYAIAGFCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFITGANLIMDYVMSNAAVARGFTKYVGTTVGVSSAKWRITVPSFPEGFNQIDLVAVVVVLLITVVICYSTKESSVVNMILTGLHILFIAFVIVIGFWKGSWKNLTQPANPENPSGFFPHGAAGVFKGASAVYLSYIGYDAVSTMAEEVKEPVKDIPIGVSGSVIIVTILYCLMAASMCMLLPYDMIDPEAPFSAAFKSDGWGWASRVIGVGASFGILTSLIVAMLGQARYMCVIGRSNVVPAWFAKVHPKTSTPVNASAFLGIFTAAIALFTDLDVLLDLVSIGTLFVFYMVANAVVYRRYVVAGTTNPWPTVSFLLSFSFTSIMFTLIWKCVPTGVAKAGMLSACGVLAVVILQLFHFTVPQARKPEFWGVPLMPWIPAISIFLNLFLLGSLDGPSYVRFGVFSAVAVLFYIFYSVHASFDAEGDGSLGQKNGEINVESKESVDQSFKV* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4253 582 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 3 570 - -
Mtr1g4253 582 Pfam C-terminus of AA_permease 502 552 IPR029485 -
Mtr1g4253 582 Pfam Amino acid permease 54 477 IPR002293 GO:0016020|GO:0022857|GO:0055085
Mtr1g4253 582 Gene3D Amino acid/polyamine transporter I 49 492 - -
Mtr1g4253 582 PANTHER AMINO ACID/POLYAMINE TRANSPORTER I, CATIONIC AMINO ACID TRANSPORTER-RELATED 3 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4253 Mtr-Chr1 54211962 54216067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4253 141 578 Organic Solute Cotransporters AT3G10600 71.982 0.0 649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4253 1 54211962 54216067 Mtr1g4253 1 54211962 54216067 ECH