Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4234 ATGGCTCGTATATTTTTCAACTTTATCCTCTTCATTTTCTTCTGGGTTTCCCCATTAGCACATTCTCGAAACATACCCCACAATGCCAAAACCACAATACTCGATGTTGTTTCTTCCATTCAAAAAACATATCAAGTTCTCAACTTTAACCAAAACCTTAAACAACAACAACAACAAAAGAGTCCATTCACTTCTTCAACATCAACACTGTCTTTGCAACTGCATTCACGTGCATCCCTTTCTTCACATGCTGACTATAAGTCACTAACATTATCCCGACTCGACCGCGACTCAGCCCGAGTCAAATACATAACAACCAAGTTAAATCAAAACTTCAACACAGATAAACTTTCTGGACCCATTATCTCAGGAACGAGTCAAGGAAGCGGCGAGTATTTCTCCAGAATCGGAATCGGTGAGCCACCGAGTCAAGCATACATGGTTCTCGACACTGGCAGCGACATAAGCTGGGTACAATGCGCACCCTGCGCCGATTGCTACCGCCAAGCCGATCCCATTTTCGAGCCAACTGCATCAGCTTCCTACGCGCCGCTCTCTTGTGAAGCCGCTCAATGCAGATATCTTGACCAATCTCAGTGTCGCAATGGTAACTGTCTCTATCAAGTCTCCTACGGTGATGGCTCATACACGGTAGGAGACTTTGTTACGGAGACAGTTACCATCGGAGTTAATAAGGTTAAGAATGTAGCGCTAGGGTGTGGTCATAATAACGAAGGCTTGTTCGTTGGTGCAGCTGGCTTAATCGGCTTAGGTGGTGGTCCACTTTCTTTTCCGGCACAGCTCAATTCGACGTCGTTTTCGTATTGCTTAGTGGATCGTGATTCTGACTTGGTTTCAACGTTAGAGTTTGATTCACCGTTTTCTCGTGACGCAGTTACCGCGCCGTTACGGCGTAATCCGCAACTGGACACGTATTATTATGTTGGACTCGTTGGGATAAGCGTCGGCGGCGAGTTGCTTGCAATACCAGAGACGAGTTTTGAGGTGGATTCCGCCGGGAATGGGGGGATTATTGTGGATTCCGGCACGGCGGTGACACGGTTGCAGAGCGATGTTTATAATGTGGTTCGTGATGCGTTTGTTAAGGGGACGAAGGATTTGCTGGCAACGAACGAGGTGTCGTTGTTTGACACGTGTTATGATTTGTCGTCGAAGACGAGCGTGGAGGTTCCGACGGTGGCGTTTCATTTCGGGGAAGGGAAAGTTTTGGTTCTTCCGGCGAAGAATTACCTGGTACCGGTTGATTCGGTAGGGACTTTTTGTTTTGCGTTTGCTCCAACGATGTCTTCTTTGTCAATAATCGGGAATATTCAACAGCAAGGGACACGTGTCAGTTTTGACCTTGCAAATTCATTAGTTGGATTTTCCCCTAACAGATGCTAA 1404 0.4651 MARIFFNFILFIFFWVSPLAHSRNIPHNAKTTILDVVSSIQKTYQVLNFNQNLKQQQQQKSPFTSSTSTLSLQLHSRASLSSHADYKSLTLSRLDRDSARVKYITTKLNQNFNTDKLSGPIISGTSQGSGEYFSRIGIGEPPSQAYMVLDTGSDISWVQCAPCADCYRQADPIFEPTASASYAPLSCEAAQCRYLDQSQCRNGNCLYQVSYGDGSYTVGDFVTETVTIGVNKVKNVALGCGHNNEGLFVGAAGLIGLGGGPLSFPAQLNSTSFSYCLVDRDSDLVSTLEFDSPFSRDAVTAPLRRNPQLDTYYYVGLVGISVGGELLAIPETSFEVDSAGNGGIIVDSGTAVTRLQSDVYNVVRDAFVKGTKDLLATNEVSLFDTCYDLSSKTSVEVPTVAFHFGEGKVLVLPAKNYLVPVDSVGTFCFAFAPTMSSLSIIGNIQQQGTRVSFDLANSLVGFSPNRC* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4234 467 PANTHER ASPARTYL PROTEASES 10 467 IPR001461 GO:0004190|GO:0006508
Mtr1g4234 467 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 147 158 IPR001969 GO:0004190|GO:0006508
Mtr1g4234 467 Pfam Xylanase inhibitor C-terminal 313 463 IPR032799 -
Mtr1g4234 467 Gene3D Acid Proteases 291 467 IPR021109 -
Mtr1g4234 467 SUPERFAMILY Acid proteases 126 467 IPR021109 -
Mtr1g4234 467 Gene3D Acid Proteases 104 290 IPR021109 -
Mtr1g4234 467 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 467 - -
Mtr1g4234 467 ProSiteProfiles Peptidase family A1 domain profile. 132 463 IPR033121 -
Mtr1g4234 467 Pfam Xylanase inhibitor N-terminal 132 284 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4234 Mtr-Chr1 53990750 53992718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4234 122 467 Miscellaneous Gene Families AT1G77480 26.178 3.64e-22 96.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4234 1 53990750 53992718 Mtr1g4234 1 53990750 53992718 ECH