Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4233 ATGATGGATTCTCCCTCTTTTTCCTCTTCTTCCTCTGACTTCGCTTCCGCCATTCAGAGTGCATCCCGGAGTAGGAGAAGTGGCGGCGGCAGCAGTGAAATGGTGGCGGCGGCAGAACAATCGCGGCGGTGGCATGATGTTTTCTGGTTAGGAATATTTGTCATTCATTTGATTGCACTGGGATTCCTTTTGGGGGTTCTTGGTCTCAACAGGTTTGAGAAAGAGAATAGACTGAACATTGATAAGTACACTCCTGGTCTTACTGGGAATCATGCCGGGTTAACCGAAACTTATTGGCCGCTTTATGCGGCTGCTGGTGGAATTGGGACTGTTCTTGGATGGACTTGGTTGTTGTTGTTGGGTTCCCAGGCTACTCAAATGATGAAAGTTTCTGTTCACATCCTCACCACTTATCTGGCTGTCATAAGTGTTTTGTGTTTCTGGACTAACCAGATTTTTTGGGGAGTTGCTTTTGCTGTTGGAGCTGCTCTTCAGTTCTTGTATGTTATATCCGTCATAGACAGACTTCCATTTACGATGCTGGTTCTGCAAAAAGCTGTGAAGATGGTTTGGAATCTTCCCGAGGTCATGAGAGTGTCTTATGCATTCATGTTTGCTGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCAGCAGGTGTTGTCGCTTCAAACTTGAGTGACGGGGGACGCTGGTGGCTTCTTGTGGTTTTTTCTGTAAGCTTATTTTGGACAGGTGCAGTGCTCTGTAATACTGTGCATGTTATAGTGTCTGGGATGGTGTTTCTTGTTCTTCTTCATGGTGGTAGAGAGGCAGCTTCAATTCCTGCTAACTCCTTAATGAAATCTTTGCAGTATGCTTTAACAACATCTTTTGGTAGCATTTGTTATGGCTCATTATTCACTGCGGCTATCAGGACACTGCGATGGGAGATACGTGGACTTAGGTCAAAGATTGGCAACAATGAGTGTTTGCTTTGCTGTGTTGATTTCCTCTTTCATCTTGTGGAGACTCTTGTTCGATTTTTTAACAAATATGCCTATGTTCAGATAGCTGTTAATGGTAAAAGCTTTAACAATTCGGCTAGAGATGCATGGGAGTTATTCCAATCAACTGGGGTTGAGGCACTTGTGGCATATGATTGTTCAGGTGCTGTTCTGCTAATGGGCACCATTTTTGGTGGATTGATAACTGGAACTTGCGCTGGTGTTTGGGCGTGGGTTAAATGGAGTGATAGAGTTATTATGATTGGCTCTACATCCATGCTCATGGGTATGGTTTTGGTTGGATTGGCAATGGTTGTGGTGGAGAGTGCTGTTACATCGATATATATTTGCTATGCAGAAGACCCTTTATTGATTCAGAGATGGGATGCTGAATTTTTCAACCAGATGTCAGAGACACTACATCACCGACTTCAATATAGGAGTGCTCGAGCCAGGGACTATCGATTCCATGATGACCCTATACGAGAAAACGCCTCTATTTGA 1491 0.4413 MMDSPSFSSSSSDFASAIQSASRSRRSGGGSSEMVAAAEQSRRWHDVFWLGIFVIHLIALGFLLGVLGLNRFEKENRLNIDKYTPGLTGNHAGLTETYWPLYAAAGGIGTVLGWTWLLLLGSQATQMMKVSVHILTTYLAVISVLCFWTNQIFWGVAFAVGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFAVLLWMALWSFGAAGVVASNLSDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREAASIPANSLMKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGLRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVNGKSFNNSARDAWELFQSTGVEALVAYDCSGAVLLMGTIFGGLITGTCAGVWAWVKWSDRVIMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLHHRLQYRSARARDYRFHDDPIRENASI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4233 496 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 16 491 - -
Mtr1g4233 496 Pfam Plasma-membrane choline transporter 157 451 IPR007603 GO:0022857|GO:0055085
Mtr1g4233 496 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 16 491 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4233 Mtr-Chr1 53976180 53980495 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4233 1 53976180 53980495 Mtr1g4233 1 53976180 53980495 ECH