Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4228 ATGGGTCGTTCTGATCGACGTAGAGTTGTTTTTGCCATGAAAGCTGGTTTAAGTTTGGCTCTTGTTTCTCTTTTCATTTACATTAAGGAAAAACAACTTAGCAAGTACTCTATTTGGGCTATTCTCACTGTTGTCGTTGTTTTCGAATTCAGCATAGGTGCAACCCTTAACAAAGGGTTCAATCGTGCTTTGGGAACAATTTCAGCAGGAGTGCTTGCTATAGGGATTGCACGATTATCAGTTTTAGTTGGTGGAGCTTTTGAGGAGCTTCTTATTGTCATAGCTATTTTCGTTGCAGGGTTCTGTGCAAGTTTTATGAAGCTATATCCTGCAATGAAGAGTTATGAATATGGCTTTCGCGTGTTTTTGTTAACGTTTTGTATTGTATTGGTGTCTGGAAGAGATGGAAAGCAGTTTTTCACCACTGCTTTTTATAGATTGGTTCTTATTGGTGTTGGTGCTGGTGTGAGTTTGTCTGTTAATATTTGCATTTACCCTATTTGGTCCGGAGAGGATCTCCACAAATTGGTCGTCAAAAATTTCCACGGAGTTGCTGCATCTGTAGAAGGTTGTGTAAATGGTTACCTACAATGTGTTGAATATGAGAGGGTGCCATCCAAAATTCTCGTATATCAAGCCTCTGATGACCCTCTTTATCGCGGTTATAGAACAGCAGTGCAATCATCAAGCCAAGAGGAGACTTTGTTAGATTTTGCATTGTGGGAGCCACCTCATGGTCCATACAAGATGTTCAATTATCCTTGGAGAAGCTATGTCAAACTTAGTGGAGCATTGAGGCATTGTGCTCTCATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCACCTCCAGAAAAGAGGTTGGTATTCTTTCAAGAACTTCAGAAGGTGGGTGCTGAAGGAGCTAAAGTACTACGTCAACTAGGAAGCAAAGTAGAAAAGATGGAGAAGCTGAGCCCACATGACATTCTGTTAGAAGTTCACGAGGCAGCCGAGCTATTGCAGATGAAGATTGACAGTCATTCATTCCTTCTAGTCAATTCAGAGAACTGGGAAGCTGTAAGACAACACCAGTCTAAACAAAATGGACAATCTGACAATCTGAGTAAGAAGTCATCGACGAATGAACTAGTGGACGATTCAAAACTTAATATAAGCATACAAGATTCGCTGCCAGAGTCGAGTTTTACACAGACCATGAACAAGGGCTTATTGTCATGGCCTCAGCTCTCTTTTTGCAGTGATGCTATACTGAATGAGCCAGAATCTAAAGTTTATGAAAGTGCTAGCTCTTTGTCTTTGGCTACATTTGCTTCACTTTTAATCGAGTTTGTTGCAAGACTTCAAAATCTTGTGGATGAGTTCCAAGATCTTGGTGAGAAGGCTAATTTTAAAGATCCCTTTGATCAACCTATATTGAAGTGA 1434 0.4052 MGRSDRRRVVFAMKAGLSLALVSLFIYIKEKQLSKYSIWAILTVVVVFEFSIGATLNKGFNRALGTISAGVLAIGIARLSVLVGGAFEELLIVIAIFVAGFCASFMKLYPAMKSYEYGFRVFLLTFCIVLVSGRDGKQFFTTAFYRLVLIGVGAGVSLSVNICIYPIWSGEDLHKLVVKNFHGVAASVEGCVNGYLQCVEYERVPSKILVYQASDDPLYRGYRTAVQSSSQEETLLDFALWEPPHGPYKMFNYPWRSYVKLSGALRHCALMVMAMHGCILSEIQAPPEKRLVFFQELQKVGAEGAKVLRQLGSKVEKMEKLSPHDILLEVHEAAELLQMKIDSHSFLLVNSENWEAVRQHQSKQNGQSDNLSKKSSTNELVDDSKLNISIQDSLPESSFTQTMNKGLLSWPQLSFCSDAILNEPESKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLGEKANFKDPFDQPILK* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4228 477 MobiDBLite consensus disorder prediction 358 378 - -
Mtr1g4228 477 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 474 - -
Mtr1g4228 477 Pfam Aluminium activated malate transporter 1 462 IPR020966 GO:0015743
Mtr1g4228 477 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 1 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4228 Mtr-Chr1 53932357 53935249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4228 1 469 Miscellaneous Gene Families AT1G25480 63.821 0.0 620
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4228 1 53932357 53935249 Mtr1g4228 1 53932357 53935249 ECH