Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4213 ATGGTTTTTCTAAGGCAATTACTTGCTTTCACTCTCTCTTCTTTTCTTCTAACTTGGCTTCTATGTTTAGCCGTGGAAGCCAACTATTCTTCTTCCAAAATTGGTCAAGGTTACCGTTTGATATCCATAGAAGAAACCCCAGATGGTGCAGTTGTGGGAATCCTCCAAGTTAAGGAGAAGAACAATATTTATGGCGTGGACATTCCTCTTTTAAGCTTCTATGTCAAGCACGAGACTGAGAGTCGTTTGAGGGTACACATAACTGATGCAAAGAAGCAAAGGTGGGAGGTTCCCTACAATCTTTTGCCAAGGGAGCAACCACCACCTCTTAAGTTGAACATTAAGAGGTTGAAGAAGAATTCATTATCAGTGTCAGAGTACTCAAGCTCTGAGCTTGTTTTCAGTTACACTTCTGATCCATTTAGCTTTGCAGTGAAAAGGAAGTCCAATGGTGATACTCTTTTTGACTCCAATTATTCTAATGAGTCAGACTCATTTCGTCCTTTAGTCTTCAAAGACCAATACTTAGAAATTTCTACCAAATTGCCCAAAAATGCTTCTTTGTATGGTTTAGGAGAGAACACACAACCAAATGGAATGAAGTTACATCCAAATGATCCTTACACTTTGTATACAACTGATATATCAGCTATTAACCTCAATTCTGATTTATATGGATCACATCCTGTATACATGGATCTCAGAAATTATGGTGGAAAACCTTATGCACATGGTGTTCTTTTGTTGAATAGCAATGGAATGGATGTGTTTTACAAAGGGAACTCTTTGACATACAAGATTATTGGAGGAATACTTGATTTTTACTTCTTTGCAGGACCTACGCCTCTGAATGTTGTTGATCAGTACACATCCTTCATTGGAAGACCAGCTCCAATGCCTTATTGGGCTTTTGGATTCCACCAATGCAGATGGGGTTATCACAACCTATCTGTTATTGAAGATGTTGTTGAGAATTACAAGAAAGCTAAAATTCCACTTGATGTGATATGGAATGATGATGATCACATGGATGGACACAAGGACTTTACAGTCAATCCAGTTAACTACCCACTTCCAAAGCTTTTAAACTTTTTGGACAGAATACACAGCATTGGCATGAAATACATTGTGATTAATGATCCTGGAATTGCTGTTAACACCAAATATGGTGTATACCAAAGGGGTATGGCTAATGATGTTTTTATCAAGTATGAAGGTGAACCATTCATGGCTATGGTTTGGCCAGGGGCTGTTTACTTTCCTGATTTTCTCAATCCTAAAACAGTTTCTTGGTGGGCCGATGAAATTCGCCGCTTCCATGAACTTGTTCCTATTGATGGATTATGGATTGACATGAATGAAGTTTCAAATTTTTGCACCGGAAAGTGTACTATTCCAAAGGAAAGATTTTGTCCACTCCAGGGAGAAAAATTACCAAATTCAACATGTTGCTTAGATTGTACAAACATCACAAGCACAAGATGGGATGATCCTCCTTACAAAATCAATGCTTCAGGAAACGAGATTCCAATAGGGTACAAAACTATAGCCACTAGTGCAGTTCATTATAATGGTGTGTTGGAATATGATGCTCATAGTCTTTTTGGTTTCTCTGAAGCCATTGCAACACACAAGGCACTTTCCGAACTTCAAGGTAAAAGACCATTCGTTTTGTCTCGTTCGACTTATGTAGGATCAGGCAAATATGCTGCTCATTGGACAGGTGACAACAAAGGAACATGGGAGGATTTAAGATATACTATATCTACCATCCTCAACTTTGGAATATTTGGCATGCCAATGGTTGGGGCAGATATATGTGGTTTCTATCCATCTTTCTATCCAACTTTAAGATACCCTATATCTACTGAAGAGCTTTGTAATAGGTGGATTGAAGTTGGTGCTTTCTATCCTTTCTCGAGGGATCATTCAAGTGTCATTTCCCCTAGACAAGAACTTTACCAATGGGAGTCAGTAGCTGAATCAGCTAGAAATGCCTTGGGGATGAGGTATAAGCTTCTACCCTATTTTTACACAATAAACTACGAGGCTCATATTAGTGGAGCTCCAATTGCTAGGCCTCTTTTCTTCTCATTTCCAAATTATATTGAATGTTATGGCCTCAGCACTCAGTTCTTACTTGGGAGCAGTTTAATGATTTCTCCTGTTCTTGAGCCAGGGAAAACAGAAGTTAAAGCACTTTTTCCTCCTGGAACATGGTACAGTTTATTTGATTTGACACAAGTCATTGTTTCAAAAGACGGAAACTATGTGACTCTTGATGCACCCTTGCATGTTGTCAATGTGCATTTATATCAGAATACTATTCTTCCTATGCAACAAGGTGGTATGGTATCTAAGGATGCTAGAATGACACCTTTTAGCCTCATTGTGACCTTTCCAGCAGGTGCAAATGAAGGAGAAGCTAAAGGGAACTTGTTCCTTGATGATGATGAGATGCCAGAAATGAAGGTAGGAAATGGCTATTCAACCTACATTGATTTCCATGCAAGTGTGAAAGAAGGAACTGTGAAAATTTGGTCACAAGTTCAAGAGGGTAAGTTTGTTTTGGATAAAGGTTTAGTTATTGACACAATAAATGTGTTGGGATTGAATTATGGAAGTGGAACATTAGTTAGTATTGAGATAGATGGGGAACCATCAATTGGTGTCTCATATGTGAAAGTTAGTACATCTGAACATAAGTACTTGTTCAAGCAAGGAGATGAAGAAAAGAAGACAGTAATGGTTGGAATCAAGGGCTTGAATATCCCTGTAGGAAAAAGATTTGCTCTTACTTGGAAGATGGGATCATAA 2817 0.3848 MVFLRQLLAFTLSSFLLTWLLCLAVEANYSSSKIGQGYRLISIEETPDGAVVGILQVKEKNNIYGVDIPLLSFYVKHETESRLRVHITDAKKQRWEVPYNLLPREQPPPLKLNIKRLKKNSLSVSEYSSSELVFSYTSDPFSFAVKRKSNGDTLFDSNYSNESDSFRPLVFKDQYLEISTKLPKNASLYGLGENTQPNGMKLHPNDPYTLYTTDISAINLNSDLYGSHPVYMDLRNYGGKPYAHGVLLLNSNGMDVFYKGNSLTYKIIGGILDFYFFAGPTPLNVVDQYTSFIGRPAPMPYWAFGFHQCRWGYHNLSVIEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTVNPVNYPLPKLLNFLDRIHSIGMKYIVINDPGIAVNTKYGVYQRGMANDVFIKYEGEPFMAMVWPGAVYFPDFLNPKTVSWWADEIRRFHELVPIDGLWIDMNEVSNFCTGKCTIPKERFCPLQGEKLPNSTCCLDCTNITSTRWDDPPYKINASGNEIPIGYKTIATSAVHYNGVLEYDAHSLFGFSEAIATHKALSELQGKRPFVLSRSTYVGSGKYAAHWTGDNKGTWEDLRYTISTILNFGIFGMPMVGADICGFYPSFYPTLRYPISTEELCNRWIEVGAFYPFSRDHSSVISPRQELYQWESVAESARNALGMRYKLLPYFYTINYEAHISGAPIARPLFFSFPNYIECYGLSTQFLLGSSLMISPVLEPGKTEVKALFPPGTWYSLFDLTQVIVSKDGNYVTLDAPLHVVNVHLYQNTILPMQQGGMVSKDARMTPFSLIVTFPAGANEGEAKGNLFLDDDEMPEMKVGNGYSTYIDFHASVKEGTVKIWSQVQEGKFVLDKGLVIDTINVLGLNYGSGTLVSIEIDGEPSIGVSYVKVSTSEHKYLFKQGDEEKKTVMVGIKGLNIPVGKRFALTWKMGS* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4213 938 Gene3D - 673 772 IPR013780 -
Mtr1g4213 938 SUPERFAMILY Glycosyl hydrolase domain 690 770 - -
Mtr1g4213 938 SUPERFAMILY Galactose mutarotase-like 34 282 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mtr1g4213 938 Gene3D Glycosidases 296 672 - -
Mtr1g4213 938 PANTHER ALPHA-GLUCOSIDASE 6 937 - -
Mtr1g4213 938 SUPERFAMILY (Trans)glycosidases 285 688 IPR017853 -
Mtr1g4213 938 PANTHER ALPHA-GLUCOSIDASE 6 937 - -
Mtr1g4213 938 ProSitePatterns Glycosyl hydrolases family 31 active site. 447 454 IPR030458 -
Mtr1g4213 938 Pfam Glycosyl hydrolases family 31 275 777 IPR000322 GO:0004553|GO:0005975
Mtr1g4213 938 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 54 184 IPR031727 -
Mtr1g4213 938 CDD GH31_MGAM_SI_GAA 294 685 - -
Mtr1g4213 938 CDD GH31_N 176 294 - -
Mtr1g4213 938 Gene3D - 775 938 IPR013780 -
Mtr1g4213 938 Gene3D glycosyl hydrolase (family 31) 31 295 - -
Mtr1g4213 938 Pfam Galactose mutarotase-like 187 254 IPR025887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4213 Mtr-Chr1 53808642 53812546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4213 22 937 Glycoside Hydrolase AT1G68560 71.320 0.0 1387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4213 1 53808642 53812546 Mtr1g4213 1 53808642 53812546 ECH