Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4202 ATGTCACTTCTTAATCAACTCTTTAGCAGAGGCGTTTTTTCTACTCGATGTAAAACATGCCTCAACCTCGCAATTTCTCGCATGAAGTTGCTACAAAACAAGCGAGATGTTCAACTCAAACAAATGCGCAAGGAGATTTCCCAATTTTTGCAGGCTGGCCAAGAACCAATTGCTAGAATTCGGGTGGAACATATCATTCGAGAACAAAATATATGGGCTGCATATGAAATATTGGAGTTATTCTGCGAGTTCGTCCTTGCACGTGTACCTATAATTGAGAGCCAGAAGGAATGCCCGTCGGAATTGCGAGAAGCCATTGCAAGTATAATTTTTGCTGCTCCTAGGTGTTCTGATATACCAGACTTATTGCACATCAAGAACTTGTTTACTACTAAATACGGGAAAGAATTTGTCACTGCAATATCTGAACTTCGTCCCGATTCAGGCGTGAACCGCACTATAATTGAAAAACTATCAGTTAGTGCTCCATCTGGAGAGATAAAACTCAAGGTCTTGACAGATATTGCAGAAGAATACAATCTAGCATGGGACTCTTCTAATACTGCAGCAGAATTTAGGAAAAATCATGAAGATCTTCTGGGAGGAGCAAAGCAAGTTGGTGTTGGAGCTGCACTTTCTCATGCTCCCAGCAAAAACAATTCCAATAATTTGTCAGCTAGTAATACGGAACAGTCTATCAAATCTACACATGATAAACAACAATACGAACAACTTGAAGCTTCTATTCCTTCTAACAATAATTCTTGGTTGAACACTAAAGAAATTGAGCAGTCACACAAAAATAACGACGTCCAATTCAATGATACTAAAACTGAGACCATATTTCAATCCTCTGATATATTGGAGAAGGCTCGAGCCGCCATAGCTTCTGCAAATCGTGCAACTGCAGCTGCTCGTGCTGCTGCTTCACTTGCACATAGTGACTTTGGATCATTGAAGCTGGAAGGTGAATCTTCATAG 981 0.4027 MSLLNQLFSRGVFSTRCKTCLNLAISRMKLLQNKRDVQLKQMRKEISQFLQAGQEPIARIRVEHIIREQNIWAAYEILELFCEFVLARVPIIESQKECPSELREAIASIIFAAPRCSDIPDLLHIKNLFTTKYGKEFVTAISELRPDSGVNRTIIEKLSVSAPSGEIKLKVLTDIAEEYNLAWDSSNTAAEFRKNHEDLLGGAKQVGVGAALSHAPSKNNSNNLSASNTEQSIKSTHDKQQYEQLEASIPSNNNSWLNTKEIEQSHKNNDVQFNDTKTETIFQSSDILEKARAAIASANRATAAARAAASLAHSDFGSLKLEGESS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4202 326 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Mtr1g4202 326 MobiDBLite consensus disorder prediction 214 235 - -
Mtr1g4202 326 PANTHER IST1 FAMILY MEMBER 15 313 IPR005061 GO:0015031
Mtr1g4202 326 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 15 313 - -
Mtr1g4202 326 Gene3D - 5 192 IPR042277 -
Mtr1g4202 326 MobiDBLite consensus disorder prediction 213 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4202 Mtr-Chr1 53627217 53632200 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4202 1 53627217 53632200 Mtr1g4202 1 53627217 53632200 ECH