Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4201 ATGGAGCTATCTATGACAACGACACTCCGATTTGGATCACAAAACCACTTCCCTCTTCCCTTACACAATTATCCAATATCAAATACAAAAACAACGCTGAGAGTGAGTGCAAAGAAAAAATCAACCATTGAAGGTATCAGCGATGAATTGAATTCCATAGCTTCTCTTAACCTTGATCATGCACCTTCTCGTAGACATGTTCGACAAGCCTTCACTCATTTGCATCAGCAACTTGATCATATCTTATTCAAGACTGCACCTGCTGGCATCATAACTCAAGAATGGTATGAAAGGAATTCAAGGGGATTGGAGATTTTCTGCAAAAGCTGGATGCCAGAACATGGCGTTCCAATTAAAGGGGCTTTGTTTTTCTGTCATGGATATGGCAGTACTTGCACTTTCTTCTTTGAAGGTATTGCAAGGAGAATTGCTGCTTCTGGGTTTGGTGTTTATGCAATGGATTTTCCGGGTTTTGGTTTATCTGAAGGATTACATGGTTACATACCAAGTTTTGATGATTTAGTCGATGATGTTATAGAATACTATACAAAAATTAAAGCTAGACCAGAGGCGAGGGATTTGCCGCAATTTATATTCGGACAGTCAATGGGCGGAGCAATTGCTCTTAAAGCTCATTTGAAGGAACCAAATGTTTGGGATGGGGTCATCCTTGTAGCTCCAATGTGTAAGATTTCAGAAGGCATGTTACCGCCAACTACAATTTTGAAGGCGTTAACACTCTTGTCTAAAATGATGCCAAAGGCAAAACTATTTCCATACAAGGATCTATCTGAACTTATTTTCCGAGAACCCGGCAAGAGAAAATTGGCAGTTTACAATGTTATTTCTTACGATGATCAAACACGATTAAGAACTGGCATGGAACTCTTAAGTGCCACTCAAGATATTGAGTCACAGTTGGAGAAGGTTTCAGCTCCACTATTGATACTTCATGGAGCAGAAGATAAGGTGACAGATCCATTGGTGAGCCAGTTTCTTTACGAGAAAGCATCTAGCAAAGACAAGACACTAAAGATCTATGAAGGAGGTTACCATGGCATTTTGGAAGGTGAACCTGATGAAAGAATTTCTTCTGTCCATAATGACATCATCTCATGGCTAGACAATAGGTGCTCAAGATAA 1143 0.3981 MELSMTTTLRFGSQNHFPLPLHNYPISNTKTTLRVSAKKKSTIEGISDELNSIASLNLDHAPSRRHVRQAFTHLHQQLDHILFKTAPAGIITQEWYERNSRGLEIFCKSWMPEHGVPIKGALFFCHGYGSTCTFFFEGIARRIAASGFGVYAMDFPGFGLSEGLHGYIPSFDDLVDDVIEYYTKIKARPEARDLPQFIFGQSMGGAIALKAHLKEPNVWDGVILVAPMCKISEGMLPPTTILKALTLLSKMMPKAKLFPYKDLSELIFREPGKRKLAVYNVISYDDQTRLRTGMELLSATQDIESQLEKVSAPLLILHGAEDKVTDPLVSQFLYEKASSKDKTLKIYEGGYHGILEGEPDERISSVHNDIISWLDNRCSR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4201 380 PANTHER PHOSPHOLIPASE-RELATED 34 378 - -
Mtr1g4201 380 SUPERFAMILY alpha/beta-Hydrolases 64 376 IPR029058 -
Mtr1g4201 380 PRINTS Alpha/beta hydrolase fold signature 147 162 IPR000073 -
Mtr1g4201 380 PRINTS Alpha/beta hydrolase fold signature 198 211 IPR000073 -
Mtr1g4201 380 PRINTS Alpha/beta hydrolase fold signature 314 328 IPR000073 -
Mtr1g4201 380 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 34 378 - -
Mtr1g4201 380 Pfam Serine aminopeptidase, S33 118 359 IPR022742 -
Mtr1g4201 380 Gene3D alpha/beta hydrolase 91 379 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4201 Mtr-Chr1 53618256 53621532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4201 35 377 Acyl Lipid Metabolism Gene Families AT1G77420 65.889 1.56e-172 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4201 1 53618256 53621532 Mtr1g4201 1 53618256 53621532 ECH