Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4184 ATGACAGAAAAAATGAAGGGATCAAATAATCAATACCAATCAATCCCTATTTCAAAGATTTTCAAAATTCAACTCCACTTCATAAATTTTCTCACCTATCTCCTAGTTTTGGTATTTGGTTTAACACTTGGAATAATCATAAGTTTCTATCTTAAAGAATGCACATTTAGTCTACAATTTACTCAGTTATCACTGTCTTCCTTACCAAGAACACAACATTTGTCACCGCCGATTGCGGTGAAACAAGAACGAGTAGGATTGAAGGATTTTCTTAAGCCTCCTCCAATTATGCATGATATGGATGATGAAGAATTGTTGTGGAGAGCTTCTATGACAGCAAAAATAGCTGAATATCCATTTGAACGAGTTCCAAAAGTTGCATTCATGTTTTTGACAAGGGGTGCTGTGTTTTTGGCACCTTTGTGGGAACAATTTTTCAAAGGACATGAAGTGTATTACTCAATTTATGTGCATTCTAATCCTTCTTATAATGGATCACACCCTGAGAGCCCTGTTTTTCACGGTAGAAGAATTCCTAGTAAGGAAGTTGAATGGGGCAATGTGAACATGATTGAAGCTGAGCGTCGCCTGCTATCGAATGCACTTCTCGATATCTCAAACCAACGATTTGTTCTCATATCAGAATCCTGCATACCACTCTTCAACTTCTCAACGATATATTCTTACTTAATAAACTCTACTCAAAACTATGTCATGTCTTATGATGATCCTAGCTCGGTCGGTCGTGGTCGTTATAACATCCAAATGTTACCCGAGGTTTCCCTCAACGAGTGGAGAAAAGGGTCCCAATGGTTTGAAATAGACAGAGAACTTGCTCTAGGAGTTGTATCTGATAGAATATACTTCCCAGTTTTTCAAGAGTATTGCAAAGGTTCATGTTATGCTGATGAACATTACTTGCCAACTTTGGTTAGCATAAAGTTTGGGGAAGGAAATTCAAATAGGAGTTTGACTTGGGTTGACTGGTCAAGGGGTGGTCCACATCCAGCTCATTTTTTGAGATCTGATGTTAATGTTAAGTTTTTGGAGAGATTAAGGAGCAAGAAATGCAAGTATAATAATGGAGAGAGCACCAATGCATGTTTTCTGTTTGCTAGGAAGTTCTTGCCTAGTACTTTGTCAAAGCTCTTGAAGATTGCACCTAAGGTTATGCAGTTTGAACACTACGACAGGCCTAATAAACATAAGTTACTATCATTCAAACAAAATATTTAA 1236 0.3738 MTEKMKGSNNQYQSIPISKIFKIQLHFINFLTYLLVLVFGLTLGIIISFYLKECTFSLQFTQLSLSSLPRTQHLSPPIAVKQERVGLKDFLKPPPIMHDMDDEELLWRASMTAKIAEYPFERVPKVAFMFLTRGAVFLAPLWEQFFKGHEVYYSIYVHSNPSYNGSHPESPVFHGRRIPSKEVEWGNVNMIEAERRLLSNALLDISNQRFVLISESCIPLFNFSTIYSYLINSTQNYVMSYDDPSSVGRGRYNIQMLPEVSLNEWRKGSQWFEIDRELALGVVSDRIYFPVFQEYCKGSCYADEHYLPTLVSIKFGEGNSNRSLTWVDWSRGGPHPAHFLRSDVNVKFLERLRSKKCKYNNGESTNACFLFARKFLPSTLSKLLKIAPKVMQFEHYDRPNKHKLLSFKQNI* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4184 411 Pfam Core-2/I-Branching enzyme 126 352 IPR003406 GO:0016020|GO:0016757
Mtr1g4184 411 PANTHER CORE-2/I-BRANCHING ENZYME 79 392 - -
Mtr1g4184 411 PANTHER CORE-2/I-BRANCHING ENZYME 5 69 - -
Mtr1g4184 411 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 79 392 IPR044174 GO:0016757
Mtr1g4184 411 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 69 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4184 Mtr-Chr1 53425127 53427579 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4184 1 53425127 53427579 Mtr1g4184 1 53425127 53427579 ECH