Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4183 ATGGCTCCAACACTCTCACCCCTCATTCTTCTTCTTCTTCTTCTGCTTTCCCATTTTGTCCTCATTGTTCAATCTTCTGTAAACCCAGATTACGAACCTCTTCTGACCTTCAAAACCGGTTCAGACCCATCCAACAAGCTCACAACATGGAAAACCAACACCGACCCATGCACTTGGACCGGCGTTTCATGTGTCAAAAACCGAGTCACTCGACTCATTCTCGAAAATCTCAACCTCCAAGGCGGCACCATCGAACCCTTAACCTCACTAACTCAGCTCCGAGTTTTGAGTCTCAAAGGAAACCGCTTTTCCGGTTCACTTCCAAACCTCTCCAACTTCACTTCCCTCAAGCTTCTCTTCTTATCTCACAACCATTTCTCCGGCGACTTTCCGTCAACGGTCACGTCACTTTTCCGTCTCTACCGTCTTGATCTATCCTACAACAATTTTTCCGGCGAGATTCCGACGATGGTGAACCGTTTGACCCATCTTCTCACACTCCGTCTCGACGAGAATAAATTCTCCGGCGTCATTCCTGAACTTAACCTTCCTGGTTTACAAGACTTCAACGTCTCCGGTAACCGTTTCTCCGGTGAGATACCGAAAACGTTGTCTGGTTTCTCCGGTTCGTCTTTCGGGCAAAACCCATTTCTATGTGGAGCTCCGTTGGAGAAATGTGGAGATGAACCGAATAAACCTGGATCCGATGGTGCAATTGCTTCACCATTGGTACCAGCAACTGTTGTGTCATCATCACCAAGCACAATGCCAACAAGAAACACAAAAACCCATGAAAAACGAGGTTCGAAAATGAGTCCTATTGTTTTAGTAGCAATTATAGTAGGTGATGTTCTTGTTCTTGGAATAGTGTGTTTACTTCTATATTGCTATTTTTGGAAAAACTATTGTTCAAAATCAAAGGAGAAAAAAGGTTTGAAGCTATTTGAGAGTGAAAAGATAGTGTATTCATCAAGTCCATACCCTACACAAGGAGGAGGAGGAGGAGGGTTTGAGAGGGGTAGAATGGTATTTTTTGAAGGTGAGAAAAGGTTTGAACTTGAGGATTTGTTACGTGCTTCAGCTGAAATGTTAGGGAAAGGTGGATTTGGAACTGCTTATAAAGCTGTTCTTGATGATGGAAATGTTGTTGCTGTGAAGAGATTGAAAGATGCACAGATTGCAGGGAAGAGGGAATTTGAACAGCATATGGAAATTCTTGGAAGGATTAGGCACCCTAATGTTGTTAGTTTAAGGGCTTATTATTTTGCTAGAGATGAGAAGCTTTTGGTTTATGATTACATGCCTAATGCTACTTTGTTCTGGCTCCTTCATGGAAACAGGGGACCTGGAAGAACCCCACTGGATTGGACCACAAGGCTCAAGATAGCTGCTGGAGCTGCACAAGGCGTAGCATTCATTCATAACTCATGCAAGTCCCTTAAACTCACTCACGGTAATATCAAATCCACCAACATACTACTTGACAAGCAAGGAGATGCACGTGTATCGGATTTTGGGCTTTCAGTTTTCAACGGTTCAAGCCCATCAGGAGCTGGTAGCAGATCAAATGGCTACCGTGCTCCTGAGGTATTGGACGGTCGAAAACAATCCCAAAAATCTGATGTCTACTCTTTTGGTGTTCTGTTGCTAGAGATGCTTACAGGGAAGTGTCCCTCTGCTGTGGAAAGTGGCGGAAGTGGTTATAATGGTGGGGTGATTGATCTTCCTAGGTGGGTGCAATCAGTTGTTAGAGAGGAATGGACTGCTGAGGTTTTTGATTTGGAATTGATGAGGTATAAGGATATTGAAGAGGAAATGGTGGGGTTGCTTCAGATTGCTATGTCTTGTACTGCTGCTTCACCTGATCAACGGCCAAGAATGTCCCATGTTGTTAAGATGATCGAGGAATTGCGTGGCGTCGAGGTGTCACCCTGTCATGACACGATGGATTCTGTCTCTGACTCACCTTCTTTGTCTGAAGATGCTTGTGCCGGTGCTACTAGTCAATAG 2010 0.4438 MAPTLSPLILLLLLLLSHFVLIVQSSVNPDYEPLLTFKTGSDPSNKLTTWKTNTDPCTWTGVSCVKNRVTRLILENLNLQGGTIEPLTSLTQLRVLSLKGNRFSGSLPNLSNFTSLKLLFLSHNHFSGDFPSTVTSLFRLYRLDLSYNNFSGEIPTMVNRLTHLLTLRLDENKFSGVIPELNLPGLQDFNVSGNRFSGEIPKTLSGFSGSSFGQNPFLCGAPLEKCGDEPNKPGSDGAIASPLVPATVVSSSPSTMPTRNTKTHEKRGSKMSPIVLVAIIVGDVLVLGIVCLLLYCYFWKNYCSKSKEKKGLKLFESEKIVYSSSPYPTQGGGGGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIAGKREFEQHMEILGRIRHPNVVSLRAYYFARDEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAAQGVAFIHNSCKSLKLTHGNIKSTNILLDKQGDARVSDFGLSVFNGSSPSGAGSRSNGYRAPEVLDGRKQSQKSDVYSFGVLLLEMLTGKCPSAVESGGSGYNGGVIDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMSCTAASPDQRPRMSHVVKMIEELRGVEVSPCHDTMDSVSDSPSLSEDACAGATSQ* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4183 669 ProSitePatterns Protein kinases ATP-binding region signature. 364 396 IPR017441 GO:0005524
Mtr1g4183 669 SUPERFAMILY L domain-like 45 223 - -
Mtr1g4183 669 CDD STKc_IRAK 364 637 - -
Mtr1g4183 669 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Mtr1g4183 669 Gene3D Phosphorylase Kinase; domain 1 339 433 - -
Mtr1g4183 669 MobiDBLite consensus disorder prediction 648 669 - -
Mtr1g4183 669 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 653 - -
Mtr1g4183 669 SUPERFAMILY Protein kinase-like (PK-like) 362 634 IPR011009 -
Mtr1g4183 669 ProSiteProfiles Protein kinase domain profile. 358 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4183 669 MobiDBLite consensus disorder prediction 645 669 - -
Mtr1g4183 669 Gene3D Ribonuclease Inhibitor 21 84 IPR032675 -
Mtr1g4183 669 PANTHER - 23 653 - -
Mtr1g4183 669 Pfam Protein kinase domain 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4183 669 Gene3D Transferase(Phosphotransferase) domain 1 434 653 - -
Mtr1g4183 669 Gene3D Ribonuclease Inhibitor 85 233 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4183 Mtr-Chr1 53421628 53424834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4183 30 669 Receptor kinase-like Gene Family AT1G68400 66.411 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr1g4183 Pkinase 6.9e-39 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4183 1 53421628 53424834 Mtr1g4183 1 53421628 53424834 ECH