Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4181 ATGACATTACTAATGGCTTGGCTTTTCATTTTCAAATCATTACTTTTCTCCCTGATTATGCTTCATGTTTCAGCTCAAGATGGAGGATGTCCAACCTCCTTTAGTTGTGGATATCTTGGCCAAATTACCTTCCCTTTCACAGTCACACAATACCCTCACTGTGGCATACTGGCCATAAGTGGTTGTGATCAAAAAAATACATCTGCTCCCAATAGCATCCAACTAGGAAAGATGCCATCCAAACAGTCTTTAATAGTTACATACGTGGAAGGTAATACCATCACGGTCTCAGATGAAACACAGCAGAAGTATTTGCTATCCAAAAAATGCCAAGCCTTTCACAATTATCCTGTTCCTCCCACTACTCCTTTGGGTTCTTTCTACATCAAATTTAATATAACTATGTTCAAATGCAATCGCTCCCTTAAGGTCACCCCTCCAAAATCATTTCAAAACTACGCAAACTGTTCCGGTTATGATATCTACTATGACCTTCAAAATATTGTGAGACCTCCTCCTTTCAAAGTGCCAAACTCTTTAGCACAGTGTACACAGTGTCAGGCTGCAGTAAGAGACATGCCCAATGATGATCCCTTTGAGTTTCTATCTCCTCAGATCTCCATTGTAGTACAATTATCTGATGATTGTAACCAGTGTCTTCATCATCAAGGGGGACGATGCCGACTTGATATTCAAGGAAAATTCCACTGTGCCGAAGGGAATAGAGGCTGGTTTGTGAAAATGTTGATACTAGGAGTTGGAGTACTAGTTGTCACAGCAGCCATATTACTAATAGTGGTCAAGATCTACTATACACGATGGAGGACACGAAATCCAACTAATCTAGTCATTGAGGTCTTTTTGAAGAAACATGGACACCTTCAAACCAAGAGGTATTGTTACTCTGAGATAAAGAAAGTGACCGACTCCTTCAAACATAAATTAGGCCAAGGAGGATTCGGCAGTGTATACAAAGGACGGTTACATGATGGACGTTATGTTGCAGTGAAGATCCTAAATGAGTTGAAGGATAGTGGTGAGGAGTTCATGAATGAAGTTGCAAGTATATGCGGAACTTCTCATGTTAACATTGTTACTCTTCTTGGGTTCTGTTTGGAAGGTTCCAAACGCGCTTTAGTTTATGAGTTTATGCAAAATGGATCCTTAGAGAAGTATATTTTTGAGGAAAATGACCAAATTCTGGATCTCCAATTGGATTGCCAAACGTTGTACTATATCGCAATTGGTGTAGCTCGAGGGCTAGAATACCTGCACAAAGGCTGCAATACTAGAATTTTGCATTTTGACATAAAACCTCATAACATTCTTTTGGATGAGAATTTCAACCCCAGAATTTCGGATTTTGGACTTGCAAAAATTTGCACAAGAAAAGAAAGTATGGTATCAATATTTGGTGCGAGAGGAACGGCAGGCTATATTGCCCCCGAGGTATTTTCTAGGAATTTTGGTGCAGTGTCACATAAGTCAGATGTTTACAGTTATGGAATGATGGTCATGGAAATGGTTGGGAGGAGAAAAAACATCAACACTGAAGTGGACCGCTCGAGTGAAATATATTTTCCTCATTGGATTTACAACCGTCTTGATTCAAATCAGGATCTTGGTTTACGGAATGTAAGAAATGAAATTGATGACGAAAAGGTGAGAAAGATGACAATAGTGGCTCTATGGTGCATACAAACCAACCCTTCAACTCGACCGGATATAAGTAAAGTGGTGGAGATGCTAGAAGGTAGAGTTGAGTTGTTGCAAATGCCACCTAAACCCTTTTTGTCATCTCCTGCAATTTCTCCACCCCATTTCTCAAGTGAGACACTAGAATCTCAGAAAATGCTAGATGCAGAACAAAGAGAGCATTACTAG 1884 0.3986 MTLLMAWLFIFKSLLFSLIMLHVSAQDGGCPTSFSCGYLGQITFPFTVTQYPHCGILAISGCDQKNTSAPNSIQLGKMPSKQSLIVTYVEGNTITVSDETQQKYLLSKKCQAFHNYPVPPTTPLGSFYIKFNITMFKCNRSLKVTPPKSFQNYANCSGYDIYYDLQNIVRPPPFKVPNSLAQCTQCQAAVRDMPNDDPFEFLSPQISIVVQLSDDCNQCLHHQGGRCRLDIQGKFHCAEGNRGWFVKMLILGVGVLVVTAAILLIVVKIYYTRWRTRNPTNLVIEVFLKKHGHLQTKRYCYSEIKKVTDSFKHKLGQGGFGSVYKGRLHDGRYVAVKILNELKDSGEEFMNEVASICGTSHVNIVTLLGFCLEGSKRALVYEFMQNGSLEKYIFEENDQILDLQLDCQTLYYIAIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFNPRISDFGLAKICTRKESMVSIFGARGTAGYIAPEVFSRNFGAVSHKSDVYSYGMMVMEMVGRRKNINTEVDRSSEIYFPHWIYNRLDSNQDLGLRNVRNEIDDEKVRKMTIVALWCIQTNPSTRPDISKVVEMLEGRVELLQMPPKPFLSSPAISPPHFSSETLESQKMLDAEQREHY* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4181 627 Pfam Protein kinase domain 312 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4181 627 SUPERFAMILY Protein kinase-like (PK-like) 293 584 IPR011009 -
Mtr1g4181 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Mtr1g4181 627 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 611 IPR045874 GO:0004672
Mtr1g4181 627 SMART serkin_6 309 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4181 627 ProSiteProfiles Protein kinase domain profile. 309 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4181 627 Gene3D Phosphorylase Kinase; domain 1 286 383 - -
Mtr1g4181 627 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Mtr1g4181 627 Gene3D Transferase(Phosphotransferase) domain 1 384 598 - -
Mtr1g4181 627 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 10 611 - -
Mtr1g4181 627 MobiDBLite consensus disorder prediction 600 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4181 Mtr-Chr1 53412966 53415936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4181 187 615 Receptor kinase-like Gene Family AT5G38260 45.786 6.32e-123 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mtr1g4181 Pkinase 1.5e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4181 1 53412966 53415936 Mtr1g4181 1 53412966 53415936 ECH