Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4175 ATGAACCCCCTTTTCATTTTCAAATCATTAATATTCTTCCAGTTACTGCTTGTTTCAGCTCAAGATGGAGGATGTCCAACCTCCTTTAGTTGTGGATATCTTGGCCAAATTACCTTCCCTTTCACAGTCACACAATACCCTCACTGTGGCATACTGGCCATAAGTGGTTGTGATAAAAAAAATACATCTGCTCCCAAAAGCATCCAACTAGGAAAGATGCCATCCAAACAGCCTTTAATAGTTACATACGTGGAAGGTAATACCATCACGGTCTCAGATAAAACACAGCGGAAGTATTTGCTATCCAAAAAATGCCAAGCCTTTCACAATTATCCTGTTCCTCCCACTACTCCTTTGGGTTCTTTCTACCTCAAATTTAATATAACTATGTTCAAATGCAATCGCTCCCTTAAGGTCACCCCTCCAAAATCATTTCAAAACTACGCAAACTGTTCCGGTTATGATATCTACTATGACCTTCAAAATATTGTGAGACCTCCTCCTTTCAAAGTGCCAAACTCTTTAGCACAGTGTACACAGTGTCAGGCTGCGGTAAGAGACATGCCCAATGATGACCCCTTTGAGTTTCTATCTCCTCAGATCTCCATTGTAGTACAATTATCTGATGATTGTAACCAGTGTCTTCATCATCAAGGGGGACGATGCCGACTTGATATTCAAGGAAAATTCCACTGTGCCGAAGGGGATAAAAGTTTGGCGTGGAAGTTAGGACTTGGCATTGGACTTCTTGTCATTATTATAACCGGGTTGCTGATTATATGGCGCTGCAAACGACGTGTTCCTGATTTCTACTCAAATAAATATACAGAGAGTAACAGTTTCTACCATGGGGTGCCGGTCTTTTCCTTTAAGGATCTTGAAGTAGCAACAAAAATTTTTGACAGTTCAAGAGAACTTGGAGAAGGAGGATTTGGCACTGTTTATTACGGAAAACTCAAAGATGGACGTGAAGTTGCTGTGAAGCGCTTATTTCAGCACAACTTTAAACGAGTTGAACAGTTCATGAATGAAATCAAAATCCTCACTCGATTGCGCCACAGAAATCTAGTTTCTCTCTATGGCTGTACTTCACATCATAGTCATGAACTATTGCTTGTATATGAATACATTTCAAATGGAACTGTTTCCAGTCATCTGCGTTGTGAATCAACGAATCCTGGCTTTCTTCCATGGCATATTCGAATGAAAGTTGCCTTAGAGACTGCTACTGCTTTGGCTTATCTCCATGCTTCTGAAATCATTCACCGTGATGTGAAAACAAACAACATTCTCCTTGACAACACCTTTTGCATTAAAGTTGCAGACTTTGGACTATCAAAACTGTTCCCAAATGATATCACACACGTCTCCACAGCTCCACAAGGAACCCCGGGATATATGGATCCGGAATATCATCAATGCTACAGGCTTACAAGCAAGAGTGATGTTTACAGCTTTGGAGTTGTACTTGTTGAGCTGATATCGTCTATGCCAGCAGTTGATATGAGCAGAGATAAGGATGAGATAAACTTGGCAAATTTAGCCATACGGAAGATTCAAAAAAGTAAAATCCATGAGCTTGTGGATCCTTCCCTTGGCTTTGAGTCAGATAAGGATGTTAAAAGGAAAATAGTTTTGATAGCAGAGTTGGCTTTTCAGTGTTTGCAGCGGGATAAGGAATTGAGGCCCTCAATGGATGAGGTTTTGGACGTGCTGAGGAGAATTGATAGTGTTAGTGGGAGGGATGAGTTTGGAAATGTAGAGGAAGTAATAGCTCGTGGAGCAGTGATGTCGAGTATTAACGTATGTTCACTGTCATCGTCCTCACCCGATCACGTTGAGATGAAATTGTTGAAGAATAAAAAGTTAACGTCTCCTACGGGTGTGACGGATAAATGGGATAGTGAATCGACTACTTCTAATGTCAGCGGTCAGTCAGCAAGCCGGATTTAA 1953 0.4101 MNPLFIFKSLIFFQLLLVSAQDGGCPTSFSCGYLGQITFPFTVTQYPHCGILAISGCDKKNTSAPKSIQLGKMPSKQPLIVTYVEGNTITVSDKTQRKYLLSKKCQAFHNYPVPPTTPLGSFYLKFNITMFKCNRSLKVTPPKSFQNYANCSGYDIYYDLQNIVRPPPFKVPNSLAQCTQCQAAVRDMPNDDPFEFLSPQISIVVQLSDDCNQCLHHQGGRCRLDIQGKFHCAEGDKSLAWKLGLGIGLLVIIITGLLIIWRCKRRVPDFYSNKYTESNSFYHGVPVFSFKDLEVATKIFDSSRELGEGGFGTVYYGKLKDGREVAVKRLFQHNFKRVEQFMNEIKILTRLRHRNLVSLYGCTSHHSHELLLVYEYISNGTVSSHLRCESTNPGFLPWHIRMKVALETATALAYLHASEIIHRDVKTNNILLDNTFCIKVADFGLSKLFPNDITHVSTAPQGTPGYMDPEYHQCYRLTSKSDVYSFGVVLVELISSMPAVDMSRDKDEINLANLAIRKIQKSKIHELVDPSLGFESDKDVKRKIVLIAELAFQCLQRDKELRPSMDEVLDVLRRIDSVSGRDEFGNVEEVIARGAVMSSINVCSLSSSSPDHVEMKLLKNKKLTSPTGVTDKWDSESTTSNVSGQSASRI* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4175 650 SUPERFAMILY Protein kinase-like (PK-like) 280 575 IPR011009 -
Mtr1g4175 650 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 650 IPR044652 -
Mtr1g4175 650 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Mtr1g4175 650 SMART serkin_6 300 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4175 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Mtr1g4175 650 Gene3D Phosphorylase Kinase; domain 1 271 376 - -
Mtr1g4175 650 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 1 650 - -
Mtr1g4175 650 Pfam Protein kinase domain 301 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4175 650 ProSiteProfiles Protein kinase domain profile. 300 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g4175 650 Gene3D Transferase(Phosphotransferase) domain 1 377 586 - -
Mtr1g4175 650 MobiDBLite consensus disorder prediction 627 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4175 Mtr-Chr1 53363411 53366473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4175 19 644 Receptor kinase-like Gene Family AT1G25390 45.385 7.64e-169 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr1g4175 Pkinase 2.7e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4175 1 53363411 53366473 Mtr1g4175 1 53363411 53366473 ECH